| 971 | -- | 972 | Juan Antonio Gómez Pulido, Bertil Schmidt, Wu-chun Feng. Accelerating Bioinformatics Applications via Emerging Parallel Computing Systems |
| 973 | -- | 981 | Edward B. Fernandez, Jason R. Villarreal, Stefano Lonardi, Walid A. Najjar. FHAST: FPGA-Based Acceleration of Bowtie in Hardware |
| 982 | -- | 994 | Jorge González-Domínguez, Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus, Manfred Schimmler, Bertil Schmidt. Parallelizing Epistasis Detection in GWAS on FPGA and GPU-Accelerated Computing Systems |
| 995 | -- | 1007 | Héctor Martínez, Joaquín Tárraga, Ignacio Medina, Sergio Barrachina, Maribel Castillo, Joaquín Dopazo, Enrique S. Quintana-Ortí. Concurrent and Accurate Short Read Mapping on Multicore Processors |
| 1008 | -- | 1020 | Sanchit Misra, Kiran Pamnany, Srinivas Aluru. Parallel Mutual Information Based Construction of Genome-Scale Networks on the Intel®Xeon Phi™ Coprocessor |
| 1021 | -- | 1033 | Anne Jeannin-Girardon, Pascal Ballet, Vincent Rodin. Large Scale Tissue Morphogenesis Simulation on Heterogenous Systems Based on a Flexible Biomechanical Cell Model |
| 1034 | -- | 1047 | Yao Xin, Will X. Y. Li, Zhaorui Zhang, Ray C. C. Cheung, Dong Song, Theodore W. Berger. An Application Specific Instruction Set Processor (ASIP) for Adaptive Filters in Neural Prosthetics |
| 1048 | -- | 1059 | Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure. Boosting the FM-Index on the GPU: Effective Techniques to Mitigate Random Memory Access |
| 1060 | -- | 1073 | Thuy-Diem Nguyen, Bertil Schmidt, Zejun Zheng, Chee Keong Kwoh. Efficient and Accurate OTU Clustering with GPU-Based Sequence Alignment and Dynamic Dendrogram Cutting |
| 1074 | -- | 1075 | Shi-Hua Zhang, Luonan Chen. Guest Editorial for Special Section on ISB/TBC 2014 |
| 1076 | -- | 1086 | H. Robert Frost, Zhigang Li, Folkert W. Asselbergs, Jason H. Moore. An Independent Filter for Gene Set Testing Based on Spectral Enrichment |
| 1087 | -- | 1093 | Dominique Chu, Anton Salykin. Evolutionary Pressures on the Yeast Transcriptome |
| 1094 | -- | 1103 | Hao Kang, Kwang-Hyun Cho, Xiaohua Douglas Zhang, Tao Zeng, Luonan Chen. Inferring Sequential Order of Somatic Mutations during Tumorgenesis based on Markov Chain Model |
| 1104 | -- | 1111 | Nan Meng, Raghu Machiraju, Kun Huang. Identify Critical Genes in Development with Consistent H3K4me2 Patterns across Multiple Tissues |
| 1112 | -- | 1122 | Yu-Qing Qiu, Xue Tian, Shi-Hua Zhang. Infer Metagenomic Abundance and Reveal Homologous Genomes Based on the Structure of Taxonomy Tree |
| 1123 | -- | 1136 | Mauro Leoncini, Manuela Montangero, Marco Pellegrini, Karina Panucia Tillan. CMStalker: A Combinatorial Tool for Composite Motif Discovery |
| 1137 | -- | 1145 | Jan Zrimec, Ales Lapanje. Fast Prediction of DNA Melting Bubbles Using DNA Thermodynamic Stability |
| 1146 | -- | 1160 | Shuqin Zhang, Hongyu Zhao, Michael K. Ng. Functional Module Analysis for Gene Coexpression Networks with Network Integration |
| 1161 | -- | 1168 | Jeong-Rae Kim, Sang-Mok Choo, Hyung-Seok Choi, Kwang-Hyun Cho. Identification of Gene Networks with Time Delayed Regulation Based on Temporal Expression Profiles |
| 1169 | -- | 1182 | Leung-Yau Lo, Kwong-Sak Leung, Kin-Hong Lee. Inferring Time-Delayed Causal Gene Network Using Time-Series Expression Data |
| 1183 | -- | 1192 | Dimitrios Kleftogiannis, Konstantinos A. Theofilatos, Spiros Likothanassis, Seferina Mavroudi. YamiPred: A Novel Evolutionary Method for Predicting Pre-miRNAs and Selecting Relevant Features |
| 1193 | -- | 1198 | Pietro Lovato, Alejandro Giorgetti, Manuele Bicego. A Multimodal Approach for Protein Remote Homology Detection |
| 1199 | -- | 1205 | Jure Bordon, Miha Moskon, Nikolaj Zimic, Miha Mraz. Fuzzy Logic as a Computational Tool for Quantitative Modelling of Biological Systems with Uncertain Kinetic Data |
| 1206 | -- | 1212 | Po-Kuei Chen, Chun-Liang Lin. Synthesis of Genetic Clock with Combinational Biologic Circuits |
| 1213 | -- | 1216 | Emmanouil I. Athanasiadis, Marilena M. Bourdakou, George M. Spyrou. ZoomOut: Analyzing Multiple Networks as Single Nodes |