Journal: IEEE/ACM Trans. Comput. Biology Bioinform.

Volume 14, Issue 3

501 -- 502Fei Wang 0001, Xiaoli Li 0001, Jason T. L. Wang, See-Kiong Ng. Guest Editorial: Special Section on Biological Data Mining and Its Applications in Healthcare
503 -- 513Hua Wang, Lin Yan, Heng Huang, Chris H. Q. Ding. From Protein Sequence to Protein Function via Multi-Label Linear Discriminant Analysis
514 -- 521JianQiang Li, Fei Wang 0001. Towards Unsupervised Gene Selection: A Matrix Factorization Framework
522 -- 533Chelsea J.-T. Ju, Zhuangtian Zhao, Wei Wang 0010. Efficient Approach to Correct Read Alignment for Pseudogene Abundance Estimates
534 -- 544Peter B. Walker, Jacob N. Norris, Anna E. Tschiffely, Melissa L. Mehalick, Craig A. Cunningham, Ian N. Davidson. Applications of Transductive Spectral Clustering Methods in a Military Medical Concussion Database
545 -- 554Jelena Stojanovic, Djordje Gligorijevic, Vladan Radosavljevic, Nemanja Djuric, Mihajlo Grbovic, Zoran Obradovic. Modeling Healthcare Quality via Compact Representations of Electronic Health Records
555 -- 563Robert Moskovitch, Hyunmi Choi, George Hripcsak, Nicholas P. Tatonetti. Prognosis of Clinical Outcomes with Temporal Patterns and Experiences with One Class Feature Selection
564 -- 575Xin Wang, Jinbo Bi. Bi-convex Optimization to Learn Classifiers from Multiple Biomedical Annotations
576 -- 577Robert W. Harrison, Ion I. Mandoiu, Alexander Zelikovsky. Guest Editors' Introduction to the Special Section on Bioinformatics Research and Applications
578 -- 586Abhishek Biswas, Desh Ranjan, Mohammad Zubair, Stephanie Zeil, Kamal Al-Nasr, Jing He. An Effective Computational Method Incorporating Multiple Secondary Structure Predictions in Topology Determination for Cryo-EM Images
587 -- 599Misagh Kordi, Mukul S. Bansal. On the Complexity of Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees
600 -- 610Xuan Guo, Jing Zhang, Zhipeng Cai, Ding-Zhu Du, Yi Pan. Searching Genome-Wide Multi-Locus Associations for Multiple Diseases Based on Bayesian Inference
611 -- 619Hao Ji, Yaohang Li, Seth H. Weinberg. Calcium Ion Fluctuations Alter Channel Gating in a Stochastic Luminal Calcium Release Site Model
620 -- 633Gustavo Rodrigues Galvão, Christian Baudet, Zanoni Dias. Sorting Circular Permutations by Super Short Reversals
634 -- 645Weihua Zheng, Kenli Li, Keqin Li, Hing-Cheung So. A Modified Multiple Alignment Fast Fourier Transform with Higher Efficiency
646 -- 656Ali Ezzat, Peilin Zhao, Min Wu, Xiaoli Li 0001, Chee Keong Kwoh. Drug-Target Interaction Prediction with Graph Regularized Matrix Factorization
657 -- 667Vo Hong Thanh, Roberto Zunino, Corrado Priami. Efficient Constant-Time Complexity Algorithm for Stochastic Simulation of Large Reaction Networks
668 -- 677James Arram, Thomas Kaplan, Wayne Luk, Peiyong Jiang. Leveraging FPGAs for Accelerating Short Read Alignment
678 -- 686Feng He, Guanghui Zhu, Yin-Ying Wang, Xing-Ming Zhao, De-Shuang Huang. PCID: A Novel Approach for Predicting Disease Comorbidity by Integrating Multi-Scale Data
687 -- 695Xiangxiang Zeng, Yuanlu Liao, Yuansheng Liu, Quan Zou. Prediction and Validation of Disease Genes Using HeteSim Scores
696 -- 712Boris Shabash, Kay C. Wiese. RNA Visualization: Relevance and the Current State-of-the-Art Focusing on Pseudoknots
713 -- 720Chen Peng, Ao Li. A Heterogeneous Network Based Method for Identifying GBM-Related Genes by Integrating Multi-Dimensional Data
721 -- 727Anastasiia Vasylchenkova, Miha Mraz, Nikolaj Zimic, Miha Moskon. Classical Mechanics Approach Applied to Analysis of Genetic Oscillators
728 -- 732Poly H. da Silva, Raphael Machado, Simone Dantas, Marília D. V. Braga. Genomic Distance with High Indel Costs
733 -- 739Min Wu, Le Ou-Yang, Xiaoli Li 0001. Protein Complex Detection via Effective Integration of Base Clustering Solutions and Co-Complex Affinity Scores
740 -- 745Fangfei Li, Yang Tang. Robust Reachability of Boolean Control Networks
746 -- 748Zhangming Yan, Ke Liu, Shunian Xiang, Zhirong Sun. txCoords: A Novel Web Application for Transcriptomic Peak Re-Mapping