| 369 | -- | 0 | Marie-France Sagot. EIC Editorial: Introducing New Associate Editors |
| 370 | -- | 386 | Chengpeng Bi. A Monte Carlo EM Algorithm for De Novo Motif Discovery in Biomolecular Sequences |
| 387 | -- | 400 | Jens Stoye, Roland Wittler. A Unified Approach for Reconstructing Ancient Gene Clusters |
| 401 | -- | 409 | Xin Chen, Yun Cui. An Approximation Algorithm for the Minimum Breakpoint Linearization Problem |
| 410 | -- | 419 | Zidong Wang, Xiaohui Liu, Yurong Liu, Jinling Liang, Veronica Vinciotti. An Extended Kalman Filtering Approach to Modeling Nonlinear Dynamic Gene Regulatory Networks via Short Gene Expression Time Series |
| 420 | -- | 426 | David Bryant, Mike A. Steel. Computing the Distribution of a Tree Metric |
| 427 | -- | 437 | Marc Hulsman, Marcel J. T. Reinders, Dick de Ridder. Evolutionary Optimization of Kernel Weights Improves Protein Complex Comembership Prediction |
| 438 | -- | 453 | Zhi-Zhong Chen, Lusheng Wang. Improved Approximation Algorithms for Reconstructing the History of Tandem Repeats |
| 454 | -- | 469 | Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente. Metrics for Phylogenetic Networks II: Nodal and Triplets Metrics |
| 470 | -- | 482 | Vassilios Sotiropoulos, Marrie-Nathalie Contou-Carrere, Prodromos Daoutidis, Yiannis N. Kaznessis. Model Reduction of Multiscale Chemical Langevin Equations: A Numerical Case Study |
| 483 | -- | 494 | Mikhail A. Roytberg, Anna Gambin, Laurent Noé, Slawomir Lasota, Eugenia Furletova, Ewa Szczurek, Gregory Kucherov. On Subset Seeds for Protein Alignment |
| 495 | -- | 505 | Guohua Jin, Luay Nakhleh, Sagi Snir, Tamir Tuller. Parsimony Score of Phylogenetic Networks: Hardness Results and a Linear-Time Heuristic |
| 506 | -- | 516 | John Thomas, Naren Ramakrishnan, Chris Bailey-Kellogg. Protein Design by Sampling an Undirected Graphical Model of Residue Constraints |
| 517 | -- | 527 | Jennifer A. Smith. RNA Search with Decision Trees and Partial Covariance Models |