| 385 | -- | 399 | Florian Leitner, Scott A. Mardis, Martin Krallinger, Gianni Cesareni, Lynette Hirschman, Alfonso Valencia. An Overview of BioCreative II.5 |
| 400 | -- | 411 | Artemy Kolchinsky, Alaa Abi-Haidar, Jasleen Kaur, Ahmed Abdeen Hamed, Luis Mateus Rocha. Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features |
| 412 | -- | 420 | Hong-Jie Dai, Po-Ting Lai, Richard Tzong-Han Tsai. Multistage Gene Normalization and SVM-Based Ranking for Protein Interactor Extraction in Full-Text Articles |
| 421 | -- | 427 | Man Lan, Jian Su. Empirical Investigations into Full-Text Protein Interaction Article Categorization Task (ACT) in the BioCreative II.5 Challenge |
| 428 | -- | 441 | Yifei Chen, Feng Liu, Bernard Manderick. BioLMiner System: Interaction Normalization Task and Interaction Pair Task in the BioCreative II.5 Challenge |
| 442 | -- | 453 | Rune Sætre, Kazuhiro Yoshida, Makoto Miwa, Takuya Matsuzaki, Yoshinobu Kano, Jun-ichi Tsujii. Extracting Protein Interactions from Text with the Unified AkaneRE Event Extraction System |
| 454 | -- | 461 | Yong-gang Cao, Zuofeng Li, Feifan Liu, Shashank Agarwal, Qing Zhang, Hong Yu. An IR-Aided Machine Learning Framework for the BioCreative II.5 Challenge |
| 462 | -- | 471 | Karin Verspoor, Christophe Roeder, Helen L. Johnson, K. Bretonnel Cohen, William A. Baumgartner Jr., Lawrence Hunter. Exploring Species-Based Strategies for Gene Normalization |
| 472 | -- | 480 | Fabio Rinaldi, Gerold Schneider, Kaarel Kaljurand, Simon Clematide, Thérèse Vachon, Martin Romacker. OntoGene in BioCreative II.5 |
| 481 | -- | 494 | Jörg Hakenberg, Robert Leaman, Nguyen Ha Vo, Siddhartha Jonnalagadda, Ryan Sullivan, Christopher Miller, Luis Tari, Chitta Baral, Graciela Gonzalez. Efficient Extraction of Protein-Protein Interactions from Full-Text Articles |
| 495 | -- | 510 | Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachandran. Cache-Oblivious Dynamic Programming for Bioinformatics |
| 511 | -- | 523 | Leonardo Tininini, Paola Bertolazzi, Alessandra Godi, Giuseppe Lancia. CollHaps: A Heuristic Approach to Haplotype Inference by Parsimony |
| 524 | -- | 536 | Ronald Jackups Jr., Jie Liang. Combinatorial Analysis for Sequence and Spatial Motif Discovery in Short Sequence Fragments |
| 537 | -- | 549 | Xiaoxu Han. Nonnegative Principal Component Analysis for Cancer Molecular Pattern Discovery |
| 550 | -- | 562 | Jia Zeng, Xiaoyu Zhao, Xiao-Qin Cao, Hong Yan. SCS: Signal, Context, and Structure Features for Genome-Wide Human Promoter Recognition |
| 563 | -- | 571 | Arthur Zimek, Fabian Buchwald, Eibe Frank, Stefan Kramer. A Study of Hierarchical and Flat Classification of Proteins |
| 572 | -- | 576 | Maria Luisa Bonet, Katherine St. John. On the Complexity of uSPR Distance |