Journal: IEEE/ACM Trans. Comput. Biology Bioinform.

Volume 1, Issue 4

137 -- 138Junhyong Kim, Inge Jonassen. Guest Editorial: WABI Special Section Part 1
139 -- 150Miklós Csürös. Maximum-Scoring Segment Sets
151 -- 158Daniel H. Huson, Tobias Dezulian, Tobias H. Klöpper, Mike A. Steel. Phylogenetic Super-Networks from Partial Trees
159 -- 170Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, Masayuki Takeda, Kenta Nakai, Satoru Miyano. An O(N:::2:::) Algorithm for Discovering Optimal Boolean Pattern Pairs
171 -- 180Jens Gramm. A Polynomial-Time Algorithm for the Matching of Crossing Contact-Map Patterns
181 -- 190Jieping Ye, Tao Li, Tao Xiong, Ravi Janardan. Using Uncorrelated Discriminant Analysis for Tissue Classification with Gene Expression Data

Volume 1, Issue 3

97 -- 0Dan Gusfield. Introduction of New Associate Editors
98 -- 108Stefanie Scheid, Rainer Spang. A Stochastic Downhill Search Algorithm for Estimating the Local False Discovery Rate
109 -- 115Andreas W. M. Dress, Daniel H. Huson. Constructing Splits Graphs
116 -- 129Michael Cameron, Hugh E. Williams, Adam Cannane. Improved Gapped Alignment in BLAST
130 -- 134Steven N. Evans, Tandy Warnow. Unidentifiable Divergence Times in Rates-across-Sites Models

Volume 1, Issue 2

66 -- 77Christina Witwer, Ivo L. Hofacker, Peter F. Stadler. Prediction of Consensus RNA Secondary Structures Including Pseudoknots
78 -- 90Vineet Bafna, Vikas Bansal. The Number of Recombination Events in a Sample History: Conflict Graph and Lower Bounds
91 -- 94Benjamin J. Raphael, Lung-Tien Liu, George Varghese. A Uniform Projection Method for Motif Discovery in DNA Sequences

Volume 1, Issue 1

4 -- 12Michael R. Williams. Introduction of New Associate Editors
13 -- 23Bernard M. E. Moret, Luay Nakhleh, Tandy Warnow, C. Randal Linder, Anna Tholse, Anneke Padolina, Jerry Sun, Ruth E. Timme. Phylogenetic Networks: Modeling, Reconstructibility, and Accuracy
24 -- 45Sara C. Madeira, Arlindo L. Oliveira. Biclustering Algorithms for Biological Data Analysis: A Survey
46 -- 52Franco P. Preparata. Sequencing-by-Hybridization Revisited: The Analog-Spectrum Proposal
53 -- 62Matthias Höchsmann, Björn Voss, Robert Giegerich. Pure Multiple RNA Secondary Structure Alignments: A Progressive Profile Approach