Rainer Spang - researchr alias

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Viewing Publication 1 - 43 from 43

2023

Anomaly detection in mixed high-dimensional molecular dataLena Buck, Tobias Schmidt, Maren Feist, Philipp Schwarzfischer, Dieter Kube, Peter J. Oefner, Helena U. Zacharias, Michael Altenbuchinger, Katja Dettmer, Wolfram Gronwald, Rainer Spang. bioinformatics, 39(8), August 2023. [doi]

2020

2018

Loss-Function Learning for Digital Tissue DeconvolutionFranziska Görtler, Stefan Solbrig, Tilo Wettig, Peter J. Oefner, Rainer Spang, Michael Altenbuchinger. recomb 2018: 75-89 [doi]

2016

Analyzing synergistic and non-synergistic interactions in signalling pathways using Boolean Nested Effect ModelsMartin Pirkl, Elisabeth Hand, Dieter Kube, Rainer Spang. bioinformatics, 32(6):893-900, 2016. [doi]

2015

2014

Exact likelihood computation in Boolean networks with probabilistic time delays, and its application in signal network reconstructionSebastian Dümcke, Johannes Bräuer, Benedict Anchang, Rainer Spang, Niko Beerenwinkel, Achim Tresch. bioinformatics, 30(3):414-419, 2014. [doi]

2013

Considering Unknown Unknowns: Reconstruction of Nonconfoundable Causal Relations in Biological NetworksMohammad Javad Sadeh, Giusi Moffa, Rainer Spang. jcb, 20(11):920-932, 2013. [doi]

Considering Unknown Unknowns - Reconstruction of Non-confoundable Causal Relations in Biological NetworksMohammad Javad Sadeh, Giusi Moffa, Rainer Spang. recomb 2013: 234-248 [doi]

2011

Estimating classification probabilities in high-dimensional diagnostic studiesInka J. Appel, Wolfram Gronwald, Rainer Spang. bioinformatics, 27(18):2563-2570, 2011. [doi]

Genomic data integration using guided clusteringMatthias Maneck, Alexandra Schrader, Dieter Kube, Rainer Spang. bioinformatics, 27(16):2231-2238, 2011. [doi]

2009

ReseqChip: Automated integration of multiple local context probe data from the MitoChip array in mitochondrial DNA sequence assemblyMarian Thieme, Claudio Lottaz, Harald Niederstätter, Walther Parson, Rainer Spang, Peter J. Oefner. bmcbi, 10:440, 2009. [doi]

2008

2007

2006

Selecting normalization genes for small diagnostic microarraysJochen Jaeger, Rainer Spang. bmcbi, 7:388, 2006. [doi]

::::OrderedList:::: - a bioconductor package for detecting similarity in ordered gene listsClaudio Lottaz, Xinan Yang, Stefanie Scheid, Rainer Spang. bioinformatics, 22(18):2315-2316, 2006. [doi]

Annotation-based Distance Measures for Patient Subgroup Discovery in Clinical Microarray StudiesClaudio Lottaz, Joern Toedling, Rainer Spang. gcb 2006: 75-91

Permutation Filtering: A Novel Concept for Significance Analysis of Large-Scale Genomic DataStefanie Scheid, Rainer Spang. recomb 2006: 338-347 [doi]

Automated in-silico detection of cell populations in flow cytometry readouts and its application to leukemia disease monitoringJoern Toedling, Peter Rhein, Richard Ratei, Leonid Karawajew, Rainer Spang. bmcbi, 7:282, 2006. [doi]

Similarities of Ordered Gene ListsXinan Yang, Stefan Bentink, Stefanie Scheid, Rainer Spang. jbcb, 4(3):693-708, 2006. [doi]

2005

2004

Finding disease specific alterations in the co-expression of genesDennis Kostka, Rainer Spang. ismb 2004: 194-199 [doi]

A Stochastic Downhill Search Algorithm for Estimating the Local False Discovery RateStefanie Scheid, Rainer Spang. tcbb, 1(3):98-108, 2004. [doi]

2002

A Novel Approach to Remote Homology Detection: Jumping AlignmentsRainer Spang, Marc Rehmsmeier, Jens Stoye. jcb, 9(5):747-760, 2002.

Prediction and uncertainty in the analysis of gene expression profilesRainer Spang, Carrie Blanchette, Harry Zuzan, Jeffrey R. Marks, Joseph Nevins, Mike West. isb, 2:33, 2002. [doi]

2001

Sequence Database Search Using Jumping AlignmentsConstantin Bannert, Marc Rehmsmeier, Rainer Spang, Jens Stoye. gcb 2001: 142

Limits of homology detection by pairwise sequence comparisonRainer Spang, Martin Vingron. bioinformatics, 17(4):338-342, 2001.

Prediction and uncertainty in the analysis of gene expression profilesRainer Spang, Carrie Blanchette, Harry Zuzan, Jeffrey R. Marks, Joseph Nevins, Mike West. gcb 2001: 102-111

2000

Sequence Database Search Using Jumping AlignmentsRainer Spang, Marc Rehmsmeier, Jens Stoye. ismb 2000: 367-375

1999

A new method for modeling protein evolutionTobias Müller, Rainer Spang, Martin Vingron. gcb 1999: 2-8

1998

Statistics of large-scale sequence searchingRainer Spang, Martin Vingron. bioinformatics, 14(3):279-284, 1998.

1997

Statistics of large scale sequence searchingRainer Spang, Martin Vingron. gcb 1997: 33-35

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