Abstract is missing.
- Shape Distributions and Protein SimilarityStefan Canzar, Jan Remy. 1-10
- Microarray Layout as Quadratic Assignment ProblemSérgio A. de Carvalho, Sven Rahmann. 11-20
- Comparison of Human Protein-Protein Interaction MapsMatthias E. Futschik, Gautam Chaurasia, Erich E. Wanker, Hanspeter Herzel. 21-32
- MPI-ClustDB: A fast String Matching Strategy Utilizing Parallel ComputingThomas Hamborg, Jürgen Kleffe. 33-39
- Ab Initio Prediction of Molecular Fragments from Tandem Mass Spectrometry DataMarkus Heinonen, Ari Rantanen, Taneli Mielikäinen, Esa Pitkänen, Juha Kokkonen, Juho Rousu. 40-53
- Classifying Permanent and Transient Protein InteractionsSamatha Kottha, Michael Schroeder. 54-63
- Characterization of Protein InteractionsRobert Küffner, Timo Duchrow, Katrin Fundel, Ralf Zimmer. 64-73
- Invited Talk: Docking Protein Domains Using a Contact Map RepresentationStefano Lise, David T. Jones. 74
- Annotation-based Distance Measures for Patient Subgroup Discovery in Clinical Microarray StudiesClaudio Lottaz, Joern Toedling, Rainer Spang. 75-91
- Invited Talk: Imaging-Based Systems BiologyGene Myers. 92
- Comparative Analysis of Cyclic Sequences: Viroids and other Small Circular RNAsAxel Mosig, Ivo L. Hofacker, Peter F. Stadler. 93-102
- Invited Talk: Combining Sequence Information with T-CoffeeCédric Notredame. 103
- PALMA: Perfect Alignments using Large Margin AlgorithmsGunnar Rätsch, Bettina Hepp, Uta Schulze, Cheng Soon Ong. 104-113
- Invited Talk: Pushing Details into Interaction NetworksRob Russell. 114
- Functional Evaluation of Domain-Domain Interactions and Human Protein Interaction NetworksAndreas Schlicker, Carola Huthmacher, Fidel RamÃrez, Thomas Lengauer, Mario Albrecht. 115-126
- Invited Talk: Encoding Evolvability: The Hierarchical Language of Polyketide Synthase Protein InteractionsMukund Thattai. 127
- Invited Talk: Genomic Variation and Incipient Speciation in Arabidopsis thalianaDetlef Weigel. 128
- A Novel, Comprehensive Method to Detect and Predict Proteinprotein Interactions Applied to the Study of Vesicular TraffickingChristof Winter, Thorsten Baust, Bernard Hoflack, Michael Schroeder. 129