Marc Rehmsmeier - researchr alias

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Viewing Publication 1 - 19 from 19

2022

MGcount: a total RNA-seq quantification tool to address multi-mapping and multi-overlapping alignments ambiguity in non-coding transcriptsAndrea Hita, Gilles Brocart, Ana Fernandez, Marc Rehmsmeier, Anna Alemany, Sol Schvartzman. bmcbi, 23(1):39, 2022. [doi]

Correction: MGcount: a total RNA-seq quantification tool to address multi-mapping and multi-overlapping alignments ambiguity in non-coding transcriptsAndrea Hita, Gilles Brocart, Ana Fernandez, Marc Rehmsmeier, Anna Alemany, Sol Schvartzman. bmcbi, 23(1):209, 2022. [doi]

2021

MOCCA: a flexible suite for modelling DNA sequence motif occurrence combinatoricsBjørn André Bredesen, Marc Rehmsmeier. bmcbi, 22(1):234, 2021. [doi]

2017

Precrec: fast and accurate precision-recall and ROC curve calculations in RTakaya Saito, Marc Rehmsmeier. bioinformatics, 33(1):145-147, 2017. [doi]

2016

KeyPathwayMiner 5Nicolas Alcaraz, Markus List, Martin Dissing-Hansen, Marc Rehmsmeier, Qihua Tan, Jan Mollenhauer, Henrik J. Ditzel, Jan Baumbach. f1000research, 5:1531, 2016. [doi]

2009

::::mkESA::::: enhanced suffix array construction toolRobert Homann, David Fleer, Robert Giegerich, Marc Rehmsmeier. bioinformatics, 25(8):1084-1085, 2009. [doi]

2006

jPREdictor: a versatile tool for the prediction of ::::cis::::-regulatory elementsThomas Fiedler, Marc Rehmsmeier. nar, 34(Web-Server-Issue):546-550, 2006. [doi]

RNAhybrid: microRNA target prediction easy, fast and flexibleJan Krüger, Marc Rehmsmeier. nar, 34(Web-Server-Issue):451-454, 2006. [doi]

RNAshapes: an integrated RNA analysis package based on abstract shapesPeter Steffen, Björn Voß, Marc Rehmsmeier, Jens Reeder, Robert Giegerich. bioinformatics, 22(4):500-503, 2006. [doi]

2002

Phase4: Automatic Evaluation of Database Search MethodsMarc Rehmsmeier. bib, 3(4):342-352, 2002.

A Novel Approach to Remote Homology Detection: Jumping AlignmentsRainer Spang, Marc Rehmsmeier, Jens Stoye. jcb, 9(5):747-760, 2002.

2001

Sequence Database Search Using Jumping AlignmentsConstantin Bannert, Marc Rehmsmeier, Rainer Spang, Jens Stoye. gcb 2001: 142

Non-symmetric score matrices and the detection of homologous transmembrane proteinsTobias Müller, Sven Rahmann, Marc Rehmsmeier. ismb 2001: 182-189

Database searching with phylogenetic treesMarc Rehmsmeier. PhD thesis, Bielefeld University, Germany, 2001. [doi]

2000

Sequence Database Search Using Jumping AlignmentsRainer Spang, Marc Rehmsmeier, Jens Stoye. ismb 2000: 367-375

1999

Prediction and Visualization of Structural Switches in RNARobert Giegerich, Dirk Haase, Marc Rehmsmeier. psb 1999: 126-137 [doi]

WWW access to the SYSTERS protein sequence cluster setAntje Krause, Pierre Nicodème, Erich Bornberg-Bauer, Marc Rehmsmeier, Martin Vingron. bioinformatics, 15(3):262-263, 1999.

Phylogeny meets sequence searchMarc Rehmsmeier, Martin Vingron. gcb 1999: 66-72

1998

Automatic clustering of large sequence databasesAntje Krause, Pierre Nicodème, Marc Rehmsmeier, Martin Vingron. gcb 1998:

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