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T-shaped alignments integrating HIV-1 near full-length genome and partial pol sequences can improve phylogenetic inference of transmission clusters

August Guang, Casey W. Dunn, Vlad Novitsky, Mark Howison, Rami Kantor. T-shaped alignments integrating HIV-1 near full-length genome and partial pol sequences can improve phylogenetic inference of transmission clusters. PLoS Computational Biology, 21(11):1013676, 2025. [doi]

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