Hardware Acceleration of the Pair-HMM Algorithm for DNA Variant Calling

Sitao Huang, Gowthami Jayashri Manikandan, Anand Ramachandran, Kyle Rupnow, Wen-mei W. Hwu, Deming Chen. Hardware Acceleration of the Pair-HMM Algorithm for DNA Variant Calling. In Jonathan W. Greene, Jason Helge Anderson, editors, Proceedings of the 2017 ACM/SIGDA International Symposium on Field-Programmable Gate Arrays, FPGA 2017, Monterey, CA, USA, February 22-24, 2017. pages 275-284, ACM, 2017. [doi]

@inproceedings{HuangMRRHC17,
  title = {Hardware Acceleration of the Pair-HMM Algorithm for DNA Variant Calling},
  author = {Sitao Huang and Gowthami Jayashri Manikandan and Anand Ramachandran and Kyle Rupnow and Wen-mei W. Hwu and Deming Chen},
  year = {2017},
  url = {http://dl.acm.org/citation.cfm?id=3021749},
  researchr = {https://researchr.org/publication/HuangMRRHC17},
  cites = {0},
  citedby = {0},
  pages = {275-284},
  booktitle = {Proceedings of the 2017 ACM/SIGDA International Symposium on Field-Programmable Gate Arrays, FPGA 2017, Monterey, CA, USA, February 22-24, 2017},
  editor = {Jonathan W. Greene and Jason Helge Anderson},
  publisher = {ACM},
  isbn = {978-1-4503-4354-1},
}