Nucleotide context models outperform protein language models for predicting antibody affinity maturation

Mackenzie M. Johnson, Kevin Sung, Hugh K. Haddox, Ashni A. Vora, Tatsuya Araki, Gabriel D. Victora, Yun S. Song, Julia Fukuyama, Frederick A. Matsen IV. Nucleotide context models outperform protein language models for predicting antibody affinity maturation. PLoS Computational Biology, 21(12):1013758, 2025. [doi]

Abstract

Abstract is missing.