CSMD: a computational subtraction-based microbiome discovery pipeline for species-level characterization of clinical metagenomic samples

Yu Liu, Paul W. Bible, Bin Zou, Qiaoxing Liang, Cong Dong, Xiaofeng Wen, Yan Li, Xiaofei Ge, Xifang Li, Xiuli Deng, Rong Ma, Shixin Guo, Juanran Liang, Tingting Chen, Wenliang Pan, Lixin Liu, Wei Chen, Xueqin Wang, Lai Wei. CSMD: a computational subtraction-based microbiome discovery pipeline for species-level characterization of clinical metagenomic samples. Bioinformatics, 36(5):1577-1583, 2020. [doi]

Authors

Yu Liu

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Paul W. Bible

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Bin Zou

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Qiaoxing Liang

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Cong Dong

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Xiaofeng Wen

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Yan Li

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Xiaofei Ge

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Xifang Li

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Xiuli Deng

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Rong Ma

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Shixin Guo

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Juanran Liang

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Tingting Chen

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Wenliang Pan

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Lixin Liu

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Wei Chen

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Xueqin Wang

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Lai Wei

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