MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data

Florian Plaza Oñate, Emmanuelle Le Chatelier, Mathieu Almeida, Alessandra C. L. Cervino, Franck Gauthier, Frédéric Magoulès, S. Dusko Ehrlich, Matthieu Pichaud. MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data. Bioinformatics, 35(9):1544-1552, 2019. [doi]

@article{OnateCACGMEP19,
  title = {MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data},
  author = {Florian Plaza Oñate and Emmanuelle Le Chatelier and Mathieu Almeida and Alessandra C. L. Cervino and Franck Gauthier and Frédéric Magoulès and S. Dusko Ehrlich and Matthieu Pichaud},
  year = {2019},
  doi = {10.1093/bioinformatics/bty830},
  url = {https://doi.org/10.1093/bioinformatics/bty830},
  researchr = {https://researchr.org/publication/OnateCACGMEP19},
  cites = {0},
  citedby = {0},
  journal = {Bioinformatics},
  volume = {35},
  number = {9},
  pages = {1544-1552},
}