Abstract is missing.
- Disulfide Connectivity Prediction with Extreme Learning MachinesMonther Alhamdoosh, Castrense Savojardo, Piero Fariselli, Rita Casadio. 5-14
- Morphological Analysis of 3D Proteins StructureVirginio Cantoni, Riccardo Gatti, Luca Lombardi. 15-21
- Automated Counting of Yeast Colonies using the Fast Radial Transform AlgorithmJan Schier, Bohumil Kovár. 22-27
- Minimum Mutation Algorithm for Gapless Metabolic Network EvolutionEsa Pitkänen, Juho Rousu, Mikko Arvas. 28-38
- A Mathematical Model for the Enhanced Cytoplasmic Transport - How to Get (Faster) to the NucleusLuna Dimitrio, Roberto Natalini, Luciano Milanesi. 39-46
- Kinetic Models and Qualitative Abstraction for Relational Learning in Systems BiologyGabriel Synnaeve, Katsumi Inoue, Andrei Doncescu, Hidetomo Nabeshima, Yoshitaka Kameya, Masakazu Ishihata, Taisuke Sato. 47-54
- Bistability and the Complex Depletion Paradox in the Double Phosphorylation-dephosphorylation CycleGuido Dell'Acqua, Alberto Maria Bersani. 55-65
- A New Latent Semantic Analysis based Methodology for Knowledge Extraction from Biomedical Literature and Biological Pathways DatabasesFrancesco Abate, Andrea Acquaviva, Elisa Ficarra, Enrico Macii. 66-74
- Prediction of Regulatory sRNAs in Prokaryotes using Machine Learning ToolsNa'el Abu-halaweh, Amit Sabnis, Robert W. Harrison. 75-81
- GAST, a Genomic Alignment Search ToolKalle Karhu, Juho Mäkinen, Jussi Rautio, Jorma Tarhio, Hugh Salamon. 82-90
- Modeling Cell Proliferation Activity of Human Interleukin-3 upon Single Residue ReplacementsMajid Masso, Iosif I. Vaisman. 93-101
- Accurate Long Read Mapping using Enhanced Suffix ArraysMichaël Vyverman, Joachim M. De Schrijver, Wim Van Criekinge, Peter Dawyndt, Veerle Fack. 102-107
- Metabolic Modeling of Converging Metabolic Pathways - Analysis of Non-steady State Stable Isotope-resolve Metabolism of UDP-GlcNAc and UDP-GalNAcHunter N. B. Moseley, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane. 108-115
- Accurate Latency Characterization for Very Large Asynchronous Spiking Neural NetworksMario Salerno, Gianluca Susi, Alessandro Cristini. 116-124
- BioDBLink: Multi-level Data Matching for Automatic Generation of Cross Links among Biochemical Pathway DatabasesJyh-Jong Tsay, Bo-Liang Wu, Hou-Ji Dai. 125-130
- Inferring Mobile Elements in S. Cerevisiae StrainsGiulia Menconi, Giovanni Battaglia, Roberto Grossi, Nadia Pisanti, Roberto Marangoni. 131-136
- Applying Conceptual Modeling to Alignment Tools One Step towards the Automation of DNA Sequence AnalysisMaria José Villanueva, Francisco Valverde, Oscar Pastor. 137-142
- SalaboMiner - A Biomedical Literature Mining Tool for Inferring the Genetics of Complex DiseasesLeonor Rib, Ricard Gavaldà, José Manuel Soria, Alfonso Buil. 143-148
- Subset Seed Extension to Protein BLASTAnna Gambin, Slawomir Lasota, Michal Startek, Maciej Sykulski, Laurent Noé, Gregory Kucherov. 149-158
- Improved Breast Cancer Prognosis based on a Hybrid Marker Selection ApproachLyamine Hedjazi, Marie-Véronique Le Lann, Tatiana Kempowsky-Hamon, Florence Dalenc, Gilles Favre. 159-164
- On Vaccination Controls for the SEIR Epidemic Model with Susceptible plus Immune Populations Tracking the Whole PopulationManuel de la Sen, Santiago Alonso-Quesada, Asier Ibeas. 165-172
- Robustness of Exon CGH Array DesignsTomasz Gambin, Pawel Stankiewicz, Maciej Sykulski, Anna Gambin. 173-182
- A Computational Strategy to Investigate Relevant Similarities between Virus and Human Proteins - Local High Similarities between Herpes and Human ProteinsAnna Marabotti, Corrado Cirielli, Daniela Agnese D'Arcangelo, Claudia Giampietri, Francesco Facchiano, Antonio Facchiano, Angelo M. Facchiano. 183-188
- Singular Value Decomposition (SVD) and BLAST - Quite Different Methods Achieving Similar ResultsBráulio Roberto Gonçalves Marinho Couto, Marcelo Matos Santoro, Marcos Augusto dos Santos. 189-195
- PadeNA: A Parallel De Novo AssemblerGaurav Thareja, Vivek Kumar, Mike Zyskowski, Simon Mercer, Bob Davidson. 196-203
- Geometrical Constraints for Ligand PositioningVirginio Cantoni, Alessandro Gaggia, Riccardo Gatti, Luca Lombardi. 204-209
- Towards Fast 3D Nanoparticle Localization for Studying Molecular Dynamics in Living CellsStefan Sokoll, Klaus D. Tönnies, Martin Heine. 210-215
- Reconfigurable Computing IP Cores for Multiple Sequence AlignmentMatina Lakka, A. Desarti, Grigorios Chrysos, Euripides Sotiriades, Ioannis Papaefstathiou, Apostolos Dollas. 216-221
- A High Accuracy CT based FEM Model of the Lumbar Spine to Determine its Biomechanical ResponseAlexander Tsouknidas, Nikolaos Michailidis, Savvas Savvakis, Kleovoulos Anagnostidis, K.-D. Bouzakis, G. Kapetanos. 222-227
- Modeling Internal Radiation TherapyEgon L. van den Broek, Theo E. Schouten. 228-233
- A Theoretical Analysis of Scalability of the Parallel Genome Assembly AlgorithmsMunib Ahmed, Ishfaq Ahmad, Samee Khan. 234-237
- Litter Effect in Mouse Phenotypic StudiesPetr Simecek, Maria Dzur-Gejdosova, Irena Chvatalova, Jirí Forejt. 238-243
- Bio-informatics in the Light of the Maximum Ordinality Principle - The Case of Duchenne Muscular DystrophyCorrado Giannantoni. 244-250
- CUDA Performance in DNA Analysis - Analysis of Cuda Architecture Performance in DNA AnalysisDaniel Cadete, António dos Anjos, Hamid Shahbazkia, Richard Christen. 253-257
- Image Analysis Combined Fluorescence Microscopy - Examples of ImageJ Software Application in Yeast StudiesEvgeny O. Puchkov. 258-261
- Chaos Level Investigation of Centre-of-pressure Single-step Displacement in Static and Dynamic Visual ConditionsLili Pei, Shujia Qin, Wei Ding, Lei Miao 0003, Hongyi Li. 262-265
- Mutational Data Loading Routines for Human Genome Databases - The BRCA1 CaseMatthijs van der Kroon, Ignacio Lereu Ramirez, Ana M. Levin, Oscar Pastor, Sjaak Brinkkemper. 266-269
- Interactive Visualization Tool for Tumor Growth SimulationsRafal Wcislo. 270-273
- Experimental Results on Multiple Pattern Matching Algorithms for Biological SequencesCharalampos S. Kouzinopoulos, Panagiotis D. Michailidis, Konstantinos G. Margaritis. 274-277
- Modeling Delays in State Transition of a Bistable Genetic Switch under the Influence of Extrinsic NoiseJaroslav Albert, Marianne Rooman. 278-282
- The Mamdani Controller in Prediction of the Survival Length in Elderly Gastric PatientsHang Zettervall, Elisabeth Rakus-Andersson, Henrik Forssell. 283-286
- Optimization of a Solid State Fermentation based on Radial Basis Function Neural Network and Particle Swarm Optimization AlgorithmBadia Dandach-Bouaoudat, Farouk Yalaoui, Lionel Amodeo, Françoise Entzmann. 287-292
- Microarray System - A System for Managing Data Produced by DNA-microarray ExperimentsAlberto Calvi, Pietro Lovato, Simone Marchesini, Barbara Oliboni, Massimo Delledonne, Alberto Ferrarini. 293-296
- A Method to Improve the Accuracy of Protein Torsion AnglesJosé C. Calvo, Julio Ortega, Mancia Anguita, Javid Taheri, Albert Y. Zomaya. 297-300
- A Computational Modelling Approach to Explore the Anti-microbial Pro-drug Delivery SystemJames T. Murphy, Ray Walshe, Marc Devocelle. 301-308
- Unified Modeling of Several Perturbation Experiments in Systems Biology - A Case Study on the Glucose Uptake of Lactococcus LactisAndrás Hartmann, Susana Vinga, João M. Lemos. 309-312
- Unrevealing Biological Process with Linear Algebra - Extracting Patterns from Noisy DataBráulio Roberto Gonçalves Marinho Couto, Marcelo Matos Santoro, Marcos Augusto dos Santos. 313-317
- Binding Free Energy Calculation via Molecular Dynamics Simulations for a miRNA: mRNA InteractionGiulia Paciello, Andrea Acquaviva, Elisa Ficarra, M. A. Deriu, A. Grosso, Enrico Macii. 318-321
- Texture Analysis of Milk Protein Gels using Digital Image AnalysisJuan Pablo Costa, Horacio Castellini, Patricia Risso, Bibiana Riquelme. 322-325
- Colour Correction for Assessing Plant Pathology using Low Quality CamerasSion Hannuna, Timo Kunkel, Nantheera Anantrasirichai, Nishan Canagarajah. 326-331
- Predicted Relative Metabolomic Turnover - Predicting Changes in the Environmental Metabolome from the MetagenomePeter E. Larsen, Frank Collart, Folker Meyer, Jack A. Gilbert. 337-345
- Automatic Annotation of Bacterial Community Sequences and Application to Infections DiagnosticVictor V. Solovyev, Asaf A. Salamov, Igor A. Seledtsov, Denis Vorobyev, Alexander G. Bachinsky. 346-353
- Infrastructure for Metagenome Data Management and AnalysisTatiana A. Tatusova. 357-362
- Proposal for Open Discussion - Informatics Challenges for Next Generation Sequencing Metagenomics ExperimentsFolker Meyer, Nikos Kyrpides. 363-366
- Annotating UniProt Metagenomic and Environmental Sequences in UniMESSamuel Patient, Maria Jesus Martin. 367-368