Abstract is missing.
- The Repeat Pattern Toolkit (RPT): Analyzing the Structure and Evolution of the C. elegans GenomePankaj Agarwal, David J. States. 1-9
- Constraint Satisfaction Techniques for Modeling Large Complexes: Application to the Central Domain of 16S Ribosomal RNARuss B. Altman, Bryn Weiser, Harry F. Noller. 10-18
- Finding an Average Core Structure: Application to the GlobinsRuss B. Altman, Mark Gerstein. 19-27
- Fitting a Mixture Model By Expectation Maximization To Discover Motifs In BiopolymerTimothy L. Bailey, Charles Elkan. 28-36
- An Intelligent System for Comparing Protein StructuresEthan Benatan. 37-43
- Protein Design by Optimization of a Sequence-Structure Quality FunctionSteven E. Brenner, Alan Berry. 44-52
- A Generalized Profile Syntax for Biomolecular Sequence Motifs and its Function in Automatic Sequence InterpretationPhilipp Bucher, Amos Bairoch. 53-61
- Integration of Competing Ancillary Assertions in Genome AssemblyChristian Burks, Rebecca J. Parsons, Michael L. Engle. 62-69
- Design and Application of a C++ Macromolecular Class LibraryWeider Chang, Ilya N. Shindyalov, Calton Pu, Philip E. Bourne. 70-77
- Genetic Map Construction with ConstraintsDominic A. Clark, Christopher J. Rawlings, Sylvie Doursenot. 78-86
- VQLM: A Visual Query Language for Macromolecular Structural DatabasesDawn M. Cohen, Kumar Vadaparty, Bill Dickinson, Hemanth Salem. 87-95
- Knowledge Discovery of Multilevel Protein MotifsDarrell Conklin, Suzanne Fortier, Janice I. Glasgow. 96-102
- Using Interval Logic for Order AssemblyZhan Cui. 103-111
- A Restriction Mapping Engine Using Constraint Logic ProgrammingTrevor I. Dix, Chut N. Yee. 112-120
- Stochastic Motif Extraction Using Hidden Markov ModelYukiko Fujiwara, Minoru Asogawa, Akihiko Konagaya. 121-129
- Assigning Function to CDS Through Qualified Query Answering: Beyond Alignment and MotifsTerry Gaasterland, Natalia Maltsev, Jorge Lobo, Guo-Hua Chen. 130-137
- RNA Modeling Using Gibbs Sampling and Stochastic Context Free GrammarsLeslie Grate, Mark Herbster, Richard Hughey, David Haussler, I. Saira Mian, Harry Noller. 138-146
- Creating a Knowledge Base of Biological Research PapersCarole D. Hafner, Kenneth Baclawski, Robert P. Futrelle, Natalya Fridman Noy, Shobana Sampath. 147-155
- The Prediction of the Degree of Exposure to Solvent of Amino Acid Residues Via Genetic ProgrammingSimon Handley. 156-160
- A Flexible Approach to Genome Map AssemblyEric Harley, Anthony J. Bonner. 161-169
- Prototyping a Genetics Deductive Database Catherine Hearne, Zhan Cui, Simon Parsons, Saki Hajnal. 170-178
- Induction of Rules for Biological Macromolecular CrystallizationDaniel N. Hennessy, Vanathi Gopalakrishnan, Bruce G. Buchanan, John M. Rosenberg, Devika Subramanian. 179-187
- Neural Networks for Determining Protein Specificity and Multiple Alignment of Binding SitesJohn M. Heumann, Alan S. Lapedes, Gary D. Stormo. 188-194
- Aligning Genomes with Inversions and SwapsJ. L. Holloway, Paul Cull. 195-202
- Representations of Metabolic Knowledge: PathwaysPeter D. Karp, Suzanne M. Paley. 203-211
- An Efficient Method for Multiple Sequence AlignmentJin Kim, Sakti Pramanik. 212-218
- Inductive Logic Programming Used to Discover Topological Constraints in Protein StructuresRoss D. King, Dominic A. Clark, Jack Shirazi, Michael J. E. Sternberg. 219-226
- Toward Unification of Taxonomy Databases in a Distributed EnvironmentHajime Kitakami, Yoshio Tateno, Takashi Gojobori. 227-235
- Discovering Side-Chain Correlations In alpha-HelicesTod M. Klingler, Douglas L. Brutlag. 236-243
- Evolution of a Computer Program for Classifying Protein Segments as Transmembrane Domains Using Genetic ProgrammingJohn R. Koza. 244-252
- DNA Sequence Analysis Using Hierarchical ART-based Classification NetworkCathie LeBlanc, Charles R. Katholi, Thomas R. Unnasch, Susan I. Hruska. 253-260
- Segmentation and Interpretation of 3D Protein ImagesLaurence Leherte, Kim Baxter, Janice I. Glasgow, Suzanne Fortier. 261-268
- High Speed Pattern Matching in Genetic Data Base with Reconfigurable HardwareEric Lemoine, Joël Quinqueton, Jean Sallantin. 269-275
- Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree GrammarsHiroshi Mamitsuka, Naoki Abe. 276-284
- Kinematic Manipulation of Molecular Chains Subject to Rigid ConstraintDinesh Manocha, Yunshan Zhu. 285-293
- Describing Multiple Levels of Abstraction in the MetabolismMichael L. Mavrovouniotis. 294-302
- Sequence Comparisons via Algorithmic Mutual InformationAleksandar Milosavljevic. 303-309
- Flow Cytometry Data Analysis: Comparing Large Multivariate Data Sets Using Classification TreesJoseph Norman. 310-313
- The Multi-Scale 3D-1D Compatibility Scoring for Inverse Protein Folding ProteinKentaro Onizuka, Masayuki Akahosi, Masato Ishikawa, Kiyoshi Asai. 314-321
- Geometric Problems in Molecular Biology and RoboticsDavid Parsons, John F. Canny. 322-330
- Intelligent DNA-Based Molecular Diagnostics Using Linked Genetic MarkersDhiraj K. Pathak, Eric P. Hoffman, Mark Perlin. 331-339
- Distributed Machine Learning: Scaling Up with Coarse-grained ParallelismFoster J. Provost, Daniel N. Hennessy. 340-347
- GeneQuiz: A Workbench for Sequence AnalysisMichael Scharf, Reinhard Schneider, Georg Casari, Peer Bork, Alfonso Valencia, Christos A. Ouzounis, Chris Sander. 348-353
- The Prediction of Human Exons By Oligonucleotide Composition and Disriminant Analysis of Spliceable Open Reading FramesVictor V. Solovyev, Asaf A. Salamov, Charles B. Lawrence. 354-362
- An Expert System for Processing Sequence Homology DataErik L. L. Sonnhammer, Richard Durbin. 363-368
- Optimally Parsing a Sequence into Different Classes Based on Multiple Types of EvidenceGary D. Stormo, David Haussler. 369-375
- An Improved System for Exon Recognition and Gene Modeling in Human DNA SequenceYin Xu, J. Ralph Einstein, Richard J. Mural, Manesh J. Shah, Edward C. Uberbacher. 376