Table of Contents

• A distributed system improves inter-observer and AI concordance in annotating interstitial fibrosis and tubular atrophyAvinash Kammardi Shashiprakash, Brendon Lutnick, Brandon Ginley, Darshana Govind, Nicholas J. Lucarelli, Kuang-Yu Jen, Avi Z. Rosenberg, Anatoly Urisman, Vighnesh Walavalkar, Jonathan E. Zuckerman, Marco Delsante, Mei Lin Z. Bissonnette, John E. Tomaszewski, David Manthey, Pinaki Sarder. [doi]
• Approximate explicit feature map for computational augmentation of RGB images of hematoxylin and eosin stained histopathological specimensIvica Kopriva, Dario Sitnik, Gorana Aralica, Arijana Pacic, Marijana Popovic Hadzija, Mirko Hadzija. [doi]
• Colorimetrical evaluation of color normalization methods for H&E-stained imagesJocelyn Liu, Samuel Lam, Paul Lemaillet, Wei-Chung Cheng. [doi]
• Breast cancer magnification-independent multi-class histopathology classification using dual-step modelNathan Lang, Devansh Saxena, Tina Yen, Julie Jorns, Bing Yu, Dong Hye Ye. [doi]
• Automated detection and quantification of Wilms' Tumor 1-positive cells in murine diabetic kidney diseaseDarshana Govind, Briana A. Santo, Brandon Ginley, Rabi Yacoub, Avi Z. Rosenberg, Kuang-Yu Jen, Vighnesh Walavalkar, Gregory E. Wilding, Amber M. Worral, Imtiaz Mohammad, Pinaki Sarder. [doi]
• Comparing architectural features between heuristically human-annotated and Artificial Intelligence (AI) generated tumor and satellite labels in early-stage oral cavity cancerDhadma Balachandran, Margaret Brandwein-Weber, Jonathan Folmsbee, Scott Doyle. [doi]
• User friendly, cloud based, whole slide image segmentationBrendon Lutnick, Avinash Kammardi Shashiprakash, David Manthey, Pinaki Sarder. [doi]
• Distance ordinal regression loss for an improved nuclei segmentationTan Nhu Nhat Doan, Chang Hee Han, Jin Tae Kwak. [doi]
• Whole slide semantic segmentation: large scale active learning for digital pathologyJonathan Folmsbee, Margaret Brandwein-Weber, Scott Doyle. [doi]
• Simple non-iterative clustering and CNNs for coarse segmentation of breast cancer whole-slide imagesRawan Albusayli, J. Dinny Graham, Nirmala Pathmanathan, Muhammad Shaban, Fayyaz Minhas, Jane E. Armes, Nasir M. Rajpoot. [doi]
• Quantitative analysis of Alzheimer's disease pathology in glioblastoma patientsMichael Brehler, Allison K. Lowman, Samuel Bobholz, Sean D. McGarry, Jennifer Connelly, Elizabeth J. Cochran, Peter S. LaViolette. [doi]
• Conditional generative adversarial networks for H&E to IF domain transfer: experiments with breast and prostate cancerGouthamrajan Nadarajan, Scott Doyle. [doi]
• A computational prediction method based on modified U-Net for cell distribution in tumor microenvironmentChang Bian, Yu Wang, Yu-an, Hanfan Wang, Yang Du, Jie Tian 0001. [doi]
• Medulloblastoma tumor classification using deep transfer learning with multi-scale EfficientNetsMarcel Bengs, Michael Bockmayr, Ulrich Schüller, Alexander Schlaefer. [doi]
• Combatting out-of-distribution errors using model-agnostic meta-learning for digital pathologyFreja Fagerblom, Karin Stacke, Jesper Molin. [doi]
• Identifying lung imaging biomarkers of BCG vaccination after infection with Mycobacterium tuberculosisThomas E. Tavolara, M. Khalid Khan Niazi, Gillian Beamer, Metin N. Gurcan. [doi]
• Active deep learning reduces annotation burden in automatic cell segmentationAritra Chowdhury, Sujoy K. Biswas, Simone Bianco 0002. [doi]
• Accurate pathological patch classification with regressionRongxiao Tang, Bo Yuan, Zhenhua Guo 0001. [doi]
• Three-dimensional shape and topology analysis of tissue-cleared tumor samplesDanny Poinapen, Tadashi Yoshizawa, Yuan Zho, Nicholas Charon, Stephanie Mou, Kiyoko Oshima, Laura Wood, Ralph H. Hruban, Wojciech Zbijewski. [doi]
• Histological grading of the prostate carcinoma using deep learning: an unsupervised approachMarkus Bauer, Sebastian Zürner, Markus Kreuz, Dominik Otto, Georg Popp, Ulf-Dietrich Braumann. [doi]
• A multi-scale conditional deep model for tumor cell ratio countingEric Cosatto, Kyle Gerard, Hans Peter Graf, Maki Ogura, Tomoharu Kiyuna, Kanako C. Hatanaka, Yoshihiro Matsuno, Yutaka Hatanaka. [doi]
• Managing class imbalance and differential staining of immune cell populations in multi-class instance segmentation of multiplexed immunofluorescence images of Lupus Nephritis biopsiesMadeleine S. Durkee, Rebecca Abraham, Junting Ai, Marcus R. Clark, Maryellen L. Giger. [doi]
• Harnessing generative adversarial networks to generate synthetic mitosis images for classification of cell imagesGal Gozes, Anat Shkolyar, Amit Gefen, Dafna Benayahu, Hayit Greenspan. [doi]
• Radiomic texture analysis of immunofluorescence images of lupus nephritis biopsies to predict patient progression to end-stage renal diseaseBradie M. Ferguson, Madeleine S. Durkee, Rebecca Abraham, Junting Ai, Hui Li 0024, Li Lan, Julian Bertini, Marcus R. Clark, Maryellen L. Giger. [doi]
• Computational Pathology: What is the way forward?Jeroen A. W. M. van der Laak. [doi]
• Eye tracking in digital pathology: identifying expert and novice patterns in visual search behaviourEllhia Sudin, Dorina Roy, Nourdin Kadi, Panagiotis Triantafyllakis, Guprit Atwal, Alastair G. Gale, Ian Ellis, David R. J. Snead, Yan Chen 0012. [doi]
• Bladder cancer organoid image analysis: textured-based gradingSeda Camalan, M. Khalid Khan Niazi, Mahesh Devarasetty, Shay Soker, Metin N. Gurcan. [doi]
• Grading and localization of histological features for bioengineered kidney constructsThomas E. Tavolara, Gabriel Carreno-Galeano, Metin N. Gurcan, Sang-Jin Lee, M. Khalid Khan Niazi. [doi]
• Multiple-datasets and multiple-label based color normalization in histopathology with cGANJing Ke, Yiqing Shen 0003, Xinyu Jiang, Yi Guo 0001, Yaobing Chen, Xiaoyao Liang. [doi]
• In silico multi-compartment detection based on multiplex immunohistochemical staining in renal pathologyKuang-Yu Jen, Leema Krishna Murali, Brendon Lutnick, Brandon Ginley, Darshana Govind, Hidetoshi Mori, Guofeng Gao, Pinaki Sarder. [doi]
• Effect of formalin fixing on chromophore saliency maps derived from multi-spectral macropathology skin imagesEleni Aloupogianni, Hiroyuki Suzuki, Takaya Ichimura, Atsushi Sasaki, Hiroto Yanagisawa, Tetsuya Tsuchida, Masahiro Ishikawa, Naoki Kobayashi 0009, Takashi Obi. [doi]
• Automatic detection of head and neck squamous cell carcinoma on pathologic slides using polarized hyperspectral imaging and machine learningXiming Zhou, Ling Ma 0004, William Brown, James V. Little, Amy Y. Chen, Larry L. Myers, Baran D. Sumer, Baowei Fei. [doi]
• Automatic glomerulus detection in renal histological imagesJonathan Moreira Cardozo Rehem, Washington Luís Conrado dos Santos, Angelo Amâncio Duarte, Luciano Rebouças de Oliveira, Michele Fúlvia Angelo. [doi]
• Neural image compression for non-small cell lung cancer subtype classification in H&E stained whole-slide imagesWitali Aswolinskiy, David Tellez, Gabriel Raya, Lieke van der Woude, Monika Looijen-Salamon, Jeroen van der Laak, Katrien Grunberg, Francesco Ciompi. [doi]
• End-to-end classification on basal-cell carcinoma histopathology whole-slides imagesDaan J. Geijs, Hans Pinckaers, Avital L. Amir, Geert J. S. Litjens. [doi]
• Few-shot weakly supervised detection and retrieval in histopathology whole-slide imagesMart van Rijthoven, Maschenka Balkenhol, Manfredo Atzori, Peter Bult, Jeroen van der Laak, Francesco Ciompi. [doi]
• Clot organization on histology is associated with radiomics features that predict treatment outcomes from mechanical thrombectomyTatsat R. Patel, Mohammad Waqas, Sarah Fricano, Adam A. Dmytriw, John Tomaszewski, Elad I. Levy, Kenneth V. Snyder, Jason M. Davies, Adnan H. Siddiqui, Vincent M. Tutino. [doi]
• Histological grading of the prostate carcinoma using deep learning: an unsupervised approach (Erratum)Markus Bauer, Sebastian Zürner, Markus Kreuz, Dominik Otto, Georg Popp, Ulf-Dietrich Braumann. [doi]
• Application and generalizability of U-Net segmentation of immune cells in inflamed tissueRebecca Abraham, Madeleine S. Durkee, Margaret Veselits, Junting Ai, Jordan D. Fuhrman, Marcus R. Clark, Maryellen L. Giger. [doi]
• Reproducibility in deep learning algorithms for digital pathology applications: a case study using the CAMELYON16 datasetsWeizhe Li, Weijie Chen. [doi]
• Co-registration tool for large format whole mount prostate multi-plex histologyMichael Brehler, Allison K. Lowman, Samuel Bobholz, Sean D. McGarry, Anjishnu Banerjee, Kenneth A. Iczkowski, Peter S. LaViolette. [doi]
• Hyperspectral microscopic imaging for the detection of head and neck squamous cell carcinoma on histologic slidesLing Ma 0004, Ximing Zhou, James V. Little, Amy Y. Chen, Larry L. Myers, Baran D. Sumer, Baowei Fei. [doi]