Cheng-Yan Kao - researchr alias

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2013

2012

2011

2009

Inferring a transcriptional regulatory network of the cytokinesis-related genes by network component analysisShun-Fu Chen, Yue-Li Juang, Wei-Kang Chou, Jin-mei Lai, Chi-Ying F. Huang, Cheng-Yan Kao, Feng-Sheng Wang. bmcsb, 3:110, 2009. [doi]

Modeling Taiwanese POS Tagging Using Statistical Methods and Mandarin Training DataUn-Gian Iunn, Jia-hung Tai, Kiat-Gak Lau, Cheng-Yan Kao, Keh-Jiann Chen. ijclclp, 14(3), 2009. [doi]

POINeT: protein interactome with sub-network analysis and hub prioritizationSheng-An Lee, Chen-hsiung Chan, Tzu-Chi Chen, Chia-Ying Yang, Kuo-chuan Huang, Chi-Hung Tsai, Jin-mei Lai, Feng-Sheng Wang, Cheng-Yan Kao, Chi-Ying F. Huang. bmcbi, 10, 2009. [doi]

Combining Agent-Based Models with Stochastic Differential Equations for Gene Regulatory NetworksTse-Yi Wang, Kuang-Chi Chen, D. Frank Hsu, Cheng-Yan Kao. bibe 2009: 405-409 [doi]

2008

Evolutionary Conservation and Interacting Preference for Identifying Protein-DNA InteractionsYao-Lin Chang, I-Hsin Liu, Cheng-Yan Kao, Jinn-Moon Yang. imsccs 2008: 1-8 [doi]

Evolutionary conservation of DNA-contact residues in DNA-binding domainsYao-Lin Chang, Huai-Kuang Tsai, Cheng-Yan Kao, Yung-Chiang Chen, Yuh-Jyh Hu, Jinn-Moon Yang. bmcbi, 9(S-6), 2008. [doi]

利用統計方法及中文訓練資料處理台語文詞性標記 (Modeling Taiwanese POS tagging with statistical methods and Mandarin training data) [In Chinese]Un-Gian Iunn, Chia-hung Tai, Kiat-Gak Lau, Keh-Jiann Chen, Cheng-Yan Kao. rocling 2008: [doi]

Ortholog-based protein-protein interaction prediction and its application to inter-species interactionsSheng-An Lee, Chen-hsiung Chan, Chi-Hung Tsai, Jin-mei Lai, Feng-Sheng Wang, Cheng-Yan Kao, Chi-Ying F. Huang. bmcbi, 9(S-12), 2008. [doi]

中文名詞組的辨識：監督式與半監督式學習法的實驗 (Chinese NP Chunking: Experiments with Supervised, and Semisupervised Learning) [In Chinese]Yen-Hsi Lin, Zhao-Ming Gao, Cheng-Yan Kao. rocling 2008: [doi]

2007

Evolutionary Conservation of DNA-Contact residues in DNA-binding DomainsYao-Lin Chang, Huai-Kuang Tsai, Cheng-Yan Kao, Yung-Chiang Chen, Jinn-Moon Yang. imsccs 2007: 9-16 [doi]

VNTRDB: a bacterial variable number tandem repeat locus databaseChia-Hung Chang, Yu-Chung Chang, Anthony Underwood, Chien-Shun Chiou, Cheng-Yan Kao. nar, 35(Database-Issue):416-421, 2007. [doi]

Positioning System in Taipei Children s Museum of Transportation and CommunicationTzu-Hsiang Chou, Ming-Hui Jin, Chi-Chung Chen, Cheng-Yan Kao. ispa 2007: 77-86 [doi]

Portable Patient Information Integration System for Patient Safety ImprovementTu-Bin Chu, Ming-Hui Jin, Li-Xin Xu, Jong-Tsong Chiang, Cheng-Yan Kao. ispa 2007: 87-95 [doi]

Reconstruction of human protein interolog network using evolutionary conserved networkTao-Wei Huang, Chung-Yen Lin, Cheng-Yan Kao. bmcbi, 8, 2007. [doi]

Modeling Taiwanese Southern-Min Tone Sandhi Using Rule-Based MethodsUn-Gian Iunn, Kiat-Gak Lau, Hong-Giau Tan-Tenn, Sheng-An Lee, Cheng-Yan Kao. ijclclp, 12(4), 2007. [doi]

A genetic algorithm for resident physician scheduling problemChi-Way Wang, Lei-Ming Sun, Ming-Hui Jin, Chung-Jung Fu, Li Liu, Chen-hsiung Chan, Cheng-Yan Kao. gecco 2007: 2203-2210 [doi]

2006

2005

Improving EAX with restricted 2-optChen-hsiung Chan, Sheng-An Lee, Cheng-Yan Kao, Huai-Kuang Tsai. gecco 2005: 1471-1476 [doi]

GEMPLS: A New QSAR Method Combining Generic Evolutionary Method and Partial Least SquaresYen-Chih Chen, Jinn-Moon Yang, Chi-Hung Tsai, Cheng-Yan Kao. evoW 2005: 125-135 [doi]

A stochastic differential equation model for quantifying transcriptional regulatory network in ::::Saccharomyces cerevisiae::::Kuang-Chi Chen, Tse-Yi Wang, Huei-Hun Tseng, Chi-Ying F. Huang, Cheng-Yan Kao. bioinformatics, 21(12):2883-2890, 2005. [doi]

Integrated minimum-set primers and unique probe design algorithms for differential detection on symptom-related pathogensYu-Cheng Huang, Chun-Fan Chang, Chen-hsiung Chan, Tze-Jung Yeh, Ya-Chun Chang, Chaur-Chin Chen, Cheng-Yan Kao. bioinformatics, 21(24):4330-4337, 2005. [doi]

台語變調系統實作研究 (A Study on Implementation of Taiwanese Tone Sandhi System) [In Chinese]Un-Gian Iunn, Sheng-an Li, Kiat-Gak Lau, Cheng-Yan Kao. rocling 2005: [doi]

A Study on Implementation of Southern-Min Taiwanese Tone Sandhi SystemUn-Gian Iunn, Kiat-Gak Lau, Sheng-an Li, Cheng-Yan Kao. paclic 2005: [doi]

Compact Genetic Algorithm for Performance Improvement in Hierarchical Sensor Networks ManagementMing-Hui Jin, Win-Zing Li, D. Frank Hsu, Cheng-Yan Kao. ispan 2005: 406-413 [doi]

Sensor Network Design and Implementation for Health Telecare and Diagnosis Assistance ApplicationsMing-Hui Jin, Ren-Guey Lee, Cheng-Yan Kao, You-Rui Wu, D. Frank Hsu, Tse-Ping Dong, Kuan-Tsae Huang. icpads 2005: 407-411 [doi]

Compact genetic algorithm for active interval scheduling in hierarchical sensor networksMing-Hui Jin, Cheng-Yan Kao, Yu-Cheng Huang, D. Frank Hsu, Ren-Guey Lee, Chih-Kung Lee. gecco 2005: 2205-2206 [doi]

Improving disulfide connectivity prediction with sequential distance between oxidized cysteinesChi-Hung Tsai, Bo-Juen Chen, Chen-hsiung Chan, Hsuan-Liang Liu, Cheng-Yan Kao. bioinformatics, 21(24):4416-4419, 2005. [doi]

Cysteine separations profiles on protein sequences infer disulfide connectivityEast Zhao, Hsuan-Liang Liu, Chi-Hung Tsai, Huai-Kuang Tsai, Chen-hsiung Chan, Cheng-Yan Kao. bioinformatics, 21(8):1415-1420, 2005. [doi]

2004

Automatically Predicting Possible Loci of Variable Number of Tandem RepeatsChia-Hung Chang, Han-Yu Chuang, Yi-Hung Chiang, Chien-Shun Chiou, Hsueh-I Lu, Cheng-Yan Kao. bibe 2004: 475-482 [doi]

Exploring of Radiation Resistance from Bacterium Deinococcus radiodurans R1 by Amino Acid Compositions of Proteins: View from Comparative Whole Protein SequencesChia-Wen Chang, Mao-Yen Chen, Wen-Chang Chang, Cheng-Yan Kao. metmbs 2004: 314-321

Comparative Molecular Binding Energy Analysis of HIV-1 Protease Inhibitors Using Genetic Algorithm-Based Partial Least Squares MethodYen-Chih Chen, Jinn-Moon Yang, Chi-Hung Tsai, Cheng-Yan Kao. gecco 2004: 385-386 [doi]

Discovering Statistically Significant Clusters by Using Iterative Genetic Algorithms in Gene Expression DataHua-Sheng Chiu, Han-Yu Chuang, Huai-Kuang Tsai, Tao-Wei Huang, Cheng-Yan Kao. metmbs 2004: 243-249

Optimal Designs for Microarray ExperimentsHan-Yu Chuang, Huai-Kuang Tsai, Cheng-Yan Kao. ispan 2004: 619-624 [doi]

Combination Methods in Microarray AnalysisHan-Yu Chuang, Hongfang Liu, Fang-An Chen, Cheng-Yan Kao, D. Frank Hsu. ispan 2004: 625-630 [doi]

Identifying Significant Genes from Microarray DataHan-Yu Chuang, Hongfang Liu, Stuart Brown, Cameron McMunn-Coffran, Cheng-Yan Kao, D. Frank Hsu. bibe 2004: 358-365 [doi]

POINT: a database for the prediction of protein-protein interactions based on the orthologous interactomeTao-Wei Huang, An-Chi Tien, Wen-Shien Huang, Yuan-Chii G. Lee, Chin-Lin Peng, Huei-Hun Tseng, Cheng-Yan Kao, Chi-Ying F. Huang. bioinformatics, 20(17):3273-3276, 2004. [doi]

Designing Multiple-Use Primer Set for Multiplex PCR by Using Compact GAsYu-Cheng Huang, Han-Yu Chuang, Huai-Kuang Tsai, Chun-Fan Chang, Cheng-Yan Kao. ppsn 2004: 511-521 [doi]

A Tool to Determine the Specificity of Antisense OligonucleotideYu-Cheng Huang, Yu-Chih Chao, Shwu-Bin Lin, Huai-Kuang Tsai, Chun-Fan Chang, Sheng-An Lee, Cheng-Yan Kao. metmbs 2004: 447-449

An Evolutionary Approach for Gene Expression PatternsHuai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fan Tsai, Cheng-Yan Kao. titb, 8(2):69-78, 2004.

An evolutionary algorithm for large traveling salesman problemsHuai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fang Tsai, Cheng-Yan Kao. tsmc, 34(4):1718-1729, 2004. [doi]

Some issues of designing genetic algorithms for traveling salesman problemsHuai-Kuang Tsai, Jinn-Moon Yang, Yuan-Fan Tsai, Cheng-Yan Kao. soco, 8(10):689-697, 2004. [doi]

Disulfide Connectivity Prediction Using Support Vector Machine and Novel FeaturesChi-Hung Tsai, Huai-Kuang Tsai, Shih-Chieh Chen, Cheng-Yan Kao. metmbs 2004: 391-395

2003

Ranking Genes for Discriminability on Microarray DataHan-Yu Chuang, Huai-Kuang Tsai, Yuan-Fan Tsai, Cheng-Yan Kao. jise, 19(6):953-966, 2003. [doi]

A Data Mining Method to Predict Transcriptional Regulatory Sites Based on Differentially Expressed Genes in Human GenomeHsien-Da Huang, Huei-Lin Chang, Tsung-Shan Tsou, Baw-Jhiune Liu, Cheng-Yan Kao, Jorng-Tzong Horng. bibe 2003: 297-304 [doi]

2002

Applying Genetic Algorithms To Finding The Optimal Gene Order In Displaying The Microarray DataHuai-Kuang Tsai, Jinn-Moon Yang, Cheng-Yan Kao. gecco 2002: 610-617

Solving traveling salesman problems by combining global and local search mechanismsHuai-Kuang Tsai, Jinn-Moon Yang, Cheng-Yan Kao. cec 2002: 1290-1295 [doi]

2001

Mining Putative Regulatory Elements in Gene Promoter RegionsJorng-Tzong Horng, Hsien-Da Huang, Cho-Chun Huang, Cheng-Yan Kao. gcb 2001: 90-95

A Genetic Algorithm for Multiple Sequence AlignmentJorng-Tzong Horng, Ching-Mei Lin, Bing-He Yang, Cheng-Yan Kao. gcb 2001: 167-170

A Theoetical Aspect of a Stochastic Sketching Method for Global OptimizationJorng-Tzong Horng, Ying-Ping Chen, Cheng-Yan Kao. jise, 17(1):47-71, 2001. [doi]

Discovering Common Structural Motifs from SSU 16 S Ribosomal RNA Secondary StructuresHsien-Da Huang, Shu-Fen Fang, Jorng-Tzong Horng, Cheng-Yan Kao. bibe 2001: 104-111

A Robust Evolutionary Algorithm for Training Neural NetworksJinn-Moon Yang, Cheng-Yan Kao. nca, 10(3):214-230, 2001. [doi]

Integrating adaptive mutations and family competition with differential evolution for flexible ligand dockingJinn-Moon Yang, Jorng-Tzong Horng, Cheng-Yan Kao. cec 2001: 473-480 [doi]

Optical Coating Designs Using the Family Competition Evolutionary AlgorithmJinn-Moon Yang, Jorng-Tzong Horng, Chih-Jen Lin, Cheng-Yan Kao. ec, 9(4):421-443, 2001.

2000

Materialized View Selection in a Data Warehouse Using Evolutionary AlgorithmsJorng-Tzong Horng, Yu-Jan Chang, Baw-Jhiune Liu, Cheng-Yan Kao. gecco 2000: 385

Using Genetic Algorithms to Solve Multiple Sequence AlignmentsJorng-Tzong Horng, Ching-Mei Lin, Baw-Jhiune Liu, Cheng-Yan Kao. gecco 2000: 883

A Genetic Algorithm for Physical Mapping ProblemsHuai-Kuang Tsai, Cheng-Yan Kao, Jinn-Moon Yang. gecco 2000: 375

Integrating adaptive mutations and family competition into genetic algorithms as function optimizerJinn-Moon Yang, Cheng-Yan Kao. soco, 4(2):89-102, 2000. [doi]

An Evolutionary Algorithms to Training Neural Networks for a Two-Spiral ProblemJinn-Moon Yang, Cheng-Yan Kao. gecco 2000: 1025-1032

A family competition evolutionary algorithm for automated docking of flexible ligands to proteinsJinn-Moon Yang, Cheng-Yan Kao. titb, 4(3):225-237, 2000.

Flexible ligand docking using a robust evolutionary algorithmJinn-Moon Yang, Cheng-Yan Kao. jcc, 21(11):988, 2000. [doi]

A Genetic Algorithm with Adaptive Mutations and Family Competition for Training Neural NetworksJinn-Moon Yang, Jorng-Tzong Horng, Cheng-Yan Kao. IJNS, 10(5):333-352, 2000. [doi]

1999

1998

Molecular binding in structure-based drug design: a case study of the population-based annealing genetic algorithmsChien-Cheng Chen, Leuo-hong Wang, Cheng-Yan Kao, Ming Ouhyoung, Wen-Chin Chen. ictai 1998: 328-335 [doi]

An Evolutionary Algorithm for Synthesizing Optical Thin-Film DesignsJinn-Moon Yang, Cheng-Yan Kao. ppsn 1998: 947-958 [doi]

A New Evolutionary Approach to Developing Neural Autonomous AgentsJinn-Moon Yang, Jorng-Tzong Horng, Cheng-Yan Kao. icra 1998: 1411-1416

1997

A Continuous Genetic Algorithm for Global OptimizationJinn-Moon Yang, Jorng-Tzong Horng, Cheng-Yan Kao. icga 1997: 230-237

Applying Family Competition to Evolution Strategies for Constrained OptimizationJinn-Moon Yang, Ying-Ping Chen, Jorng-Tzong Horng, Cheng-Yan Kao. eps 1997: 201-211

1996

A Combined Evolutionary Algorithm for Real Parameters OptimizationJinn-Moon Yang, Cheng-Yan Kao. icec 1996: 732-737

1994

A Genetic Algorithm for Database Query OptimizationJorng-Tzong Horng, Baw-Jhiune Liu, Cheng-Yan Kao. icec 1994: 350-355

A Genetic Algorithm Approach for Set Covering ProblemsWen-Chih Huang, Cheng-Yan Kao, Jorng-Tzong Horng. icec 1994: 569-574

Using an Annealing Genetic Algorihtm to Solve Global Energy Minimazation ProblemLeuo-hong Wang, Cheng-Yan Kao, Ming Ouhyoung, Wen-Chin Chen. ictai 1994: 404-410

1993

Applying the genetic approach to simulated annealing in solving some NP-hard problemsFeng-Tse Lin, Cheng-Yan Kao, Ching-Chi Hsu. tsmc, 23(6):1752-1767, 1993. [doi]

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