Simon Tavaré - researchr alias

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Viewing Publication 1 - 27 from 27

2023

Gradient Estimation for Binary Latent Variables via Gradient Variance ClippingRussell Z. Kunes, Mingzhang Yin, Max Land, Doron Haviv, Dana Pe'er, Simon Tavaré. AAAI 2023: 8405-8412 [doi]

2022

A note on the Screaming Toes gameSimon Tavaré. jap, 59(1):118-130, 2022. [doi]

2016

HDTD: analyzing multi-tissue gene expression dataAnestis Touloumis, John C. Marioni, Simon Tavaré. bioinformatics, 32(14):2193-2195, 2016. [doi]

2014

Normalization of metabolomics data with applications to correlation mapsAlexandra Jauhiainen, Basetti Madhu, Masako Narita, Masashi Narita, John Griffiths, Simon Tavaré. bioinformatics, 30(15):2155-2161, 2014. [doi]

Flexible analysis of RNA-seq data using mixed effects modelsErnest Turro, William J. Astle, Simon Tavaré. bioinformatics, 30(2):180-188, 2014. [doi]

2013

Automated quantification of the schooling behaviour of sticklebacksReza Ardekani, Anna K. Greenwood, Catherine L. Peichel, Simon Tavaré. ejivp, 2013:61, 2013. [doi]

2011

BayesPeak - an R package for analysing ChIP-seq dataJonathan M. Cairns, Christiana Spyrou, Rory Stark, Mike L. Smith, Andy G. Lynch, Simon Tavaré. bioinformatics, 27(5):713-714, 2011. [doi]

Modeling Evolutionary Dynamics of Epigenetic Mutations in Hierarchically Organized TumorsAndrea Sottoriva, Louis Vermeulen, Simon Tavaré. ploscb, 7(5), 2011. [doi]

2010

CNAnova: a new approach for finding recurrent copy number abnormalities in cancer SNP microarray dataSergii Ivakhno, Simon Tavaré. bioinformatics, 26(11):1395-1402, 2010. [doi]

CNAseg - a novel framework for identification of copy number changes in cancer from second-generation sequencing dataSergii Ivakhno, Tom Royce, Anthony J. Cox, Dirk J. Evers, R. Keira Cheetham, Simon Tavaré. bioinformatics, 26(24):3051-3058, 2010. [doi]

Data analysis issues for allele-specific expression using Illumina s GoldenGate assayMatthew E. Ritchie, Matthew S. Forrest, Antigone S. Dimas, Caroline Daelemans, Emmanouil T. Dermitzakis, Panagiotis Deloukas, Simon Tavaré. bmcbi, 11:280, 2010. [doi]

Identification and correction of previously unreported spatial phenomena using raw Illumina BeadArray dataMike L. Smith, Mark J. Dunning, Simon Tavaré, Andy G. Lynch. bmcbi, 11:208, 2010. [doi]

Integrating Approximate Bayesian Computation with Complex Agent-Based Models for Cancer ResearchAndrea Sottoriva, Simon Tavaré. compstat 2010: 57-66 [doi]

2009

Finding Behavioral Motifs in Fly TrajectoriesDhruv Grover, Simon Tavaré. cominfsys, 9(3):283-294, 2009. [doi]

Strategies for analyzing highly enriched IP-chip datasetsSimon R. V. Knott, Christopher J. Viggiani, Oscar M. Aparicio, Simon Tavaré. bmcbi, 10:305, 2009. [doi]

BayesPeak: Bayesian analysis of ChIP-seq dataChristiana Spyrou, Rory Stark, Andy G. Lynch, Simon Tavaré. bmcbi, 10:299, 2009. [doi]

2008

Statistical issues in the analysis of Illumina dataMark J. Dunning, Nuno L. Barbosa-Morais, Andy G. Lynch, Simon Tavaré, Matthew E. Ritchie. bmcbi, 9, 2008. [doi]

2007

2006

A Tale of Three Couplings: Poisson-Dirichlet and GEM Approximations for Random PermutationsRichard Arratia, Andrew D. Barbour, Simon Tavaré. cpc, 15(1-2):31-62, 2006. [doi]

BioHMM: a heterogeneous hidden Markov model for segmenting array CGH dataJ. C. Marioni, Natalie P. Thorne, Simon Tavaré. bioinformatics, 22(9):1144-1146, 2006. [doi]

2001

A Model for Phylogenetic Inference Using Structural and Chemical CovariatesSimon Tavaré, Dean C. Adams, Olivier Fedrigo, Gavin J. P. Naylor. psb 2001: 215-225 [doi]

2000

The Effect of Nonhomogeneous Clone Length Distribution on the Progress of an STS Mapping ProjectSophie Schbath, Nathalie Bossard, Simon Tavaré. jcb, 7(1-2):47-57, 2000.

1999

The Poisson-Dirichlet Distribution And The Scale-Invariant Poisson ProcessRichard Arratia, Andrew D. Barbour, Simon Tavaré. cpc, 8(5):407-416, 1999.

1994

A Rate for the Erdös-Turan LawAndrew D. Barbour, Simon Tavaré. cpc, 3:167-176, 1994.

1992

Limit Theorems for Combinatorial Structures via Discrete Process ApproximationsRichard Arratia, Simon Tavaré. rsa, 3(3):321-346, 1992.

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