Abstract is missing.
- Forests of Latent Tree Models for the Detection of Genetic AssociationsChristine Sinoquet, Raphaël Mourad, Philippe Leray. 5-14
- A Deterministic Model of Bone Marrow with Homeostatic Properties and with Steady Production of Differentiated CellsManish P. Kurhekar, Umesh A. Deshpande. 15-23
- Laser Doppler Flowmeters Prototypes Validation using Monte Carlo SimulationsEdite Figueiras, Rita Campos, Ricardo Oliveira, Luis F. Requicha Ferreira, Frits F. M. de Mul, Anne Humeau-Heurtier. 24-33
- A Generalized Hidden Markov Model for Prediction of Cis-regulatory Modules in Eukaryote Genomes and Description of Their Internal StructureAnna A. Nilulova, Alexander V. Favorov, Vsevolod Makeev, Andrey A. Mironov. 34-41
- Introducing Data Provenance and Error Handling for NGS Workflows within the MOLGENIS Computational FrameworkHeorhiy Byelas, Martijn Dijkstra, Morris A. Swertz. 42-50
- Simulation of Bacterial Genome Evolution under Replicational Mutational PressuresPawel Blazej, Pawel Mackiewicz, Stanislaw Cebrat. 51-57
- Genome Halving by Block InterchangeAntoine Thomas, Aïda Ouangraoua, Jean-Stéphane Varré. 58-65
- A n2 RNA Secondary Structure Prediction AlgorithmMarkus E. Nebel, Anika Scheid. 66-75
- A Vaccination Control Law based on Feedback Linearization Techniques for SEIR Epidemic ModelsSantiago Alonso-Quesada, Manuel de la Sen, Asier Ibeas. 76-85
- Trading Running Time for Memory in Phylogenetic Likelihood ComputationsFernando Izquierdo-Carrasco, Julien Gagneur, Alexandros Stamatakis. 86-95
- Dual-energy X-ray Absorptiometry as an Indicator for Fragility Fracture Risks of the Femoral NeckAlexander Tsouknidas, Nikolaos Michailidis, Kleovoulos Anagnostidis, Antonios Lontos. 96-101
- An Efficient Parallel GPU Evaluation of Small Angle X-ray Scattering ProfilesLubomir D. Antonov, Christian Andreetta, Thomas Hamelryck. 102-108
- Matching Two-dimensional Gel Electrophoresis' SpotsAntónio dos Anjos, Bjarne Kjær Ersbøll, Faroq Al-Tam, Hamid Reza Shahbazkia. 111-117
- Application of Genome Linguistic Approaches for Identification of Genomic Island in Bacterial Genomes and Tracking down their Origins - Genome Linguistics to Visualize Horizontal Gene ExchangeOliver Bezuidt, Kingdom Mncube, Oleg N. Reva. 118-123
- Prediction of Significant Cruciform Structures from Sequence in Topologically Constrained DNA - A Probabilistic Modelling ApproachMatej Lexa, Lucie Navrátilová, Karel Nejedlý, Marie Brázdová. 124-130
- A Memetic Algorithm for Protein Structure Prediction based on the 2D Triangular Lattice ModelJyh-Jong Tsay, Shih-Chieh Su. 131-136
- Predicting New Human Drug Targets by using Feature Selection TechniquesEduardo Campos dos Santos, Bráulio Roberto Gonçalves Marinho Couto, Marcos Augusto dos Santos, Julio Cesar Dias Lopes. 137-142
- Pycoevol - A Python Workflow to Study Protein-protein CoevolutionFábio Madeira, Ludwig Krippahl. 143-149
- Inference of Gene Regulatory Networks by Extended Kalman Filtering using Gene Expression Time Series DataRamouna Fouladi, Emad Fatemizadeh, S. Shahriar Arab. 150-155
- Integrating Pathway Enrichment and Gene Network Analysis Provides Accurate Disease ClassificationMaysson Al-Haj Ibrahim, Sabah Jassim, Michael Anthony Cawthorne, Kenneth Langlands. 156-163
- Prediction of Protein Interactions on HIV-1-Human PPI Data using a Novel Closure-based Integrated ApproachKartick Chandra Mondal, Nicolas Pasquier, Anirban Mukhopadhyay 0001, Célia da Costa Pereira, Ujjwal Maulik, Andrea Tettamanzi. 164-173
- Study of Protein Structure Alignment Problem in Parameterized ComputationCody Ashby, Kun Wang, Carole L. Cramer, Xiuzhen Huang. 174-181
- Performance Study of Parallel Hybrid Multiple Pattern Matching Algorithms for Biological SequencesCharalampos S. Kouzinopoulos, Panagiotis D. Michailidis, Konstantinos G. Margaritis. 182-187
- Benefits of Genetic Algorithm Feature-based Resampling for Protein Structure PredictionTrent Higgs, Bela Stantic, Tamjidul Hoque, Abdul Sattar. 188-194
- MASon: Million Alignments in Seconds - A Platform Independent Pairwise Sequence Alignment Library for next Generation Sequencing DataPhilipp Rescheneder, Arndt von Haeseler, Fritz J. Sedlazeck. 195-201
- Efficient Path Kernels for Reaction Function PredictionMarkus Heinonen, Niko Välimäki, Veli Mäkinen, Juho Rousu. 202-207
- cswHMM: A Novel Context Switching Hidden Markov Model for Biological Sequence AnalysisVojtech Bystrý, Matej Lexa. 208-213
- Wrapper and Filter Metrics for PSO-based Class Balance Applied to Protein Subcellular LocalizationS. García-López, Jorge Alberto Jaramillo-Garzón, J. C. Higuita-Vásquez, César Germán Castellanos-Domínguez. 214-219
- Statistical Mechanics of Proteins in the Random Coil StateCigdem Sevim Bayrak, Burak Erman. 220-225
- Improvements to a Multiple Protein Sequence Alignment ToolAndré Atanasio M. Almeida, Zanoni Dias. 226-233
- Prediction of Chimeric Protein FoldRuben Acuña, Zoé Lacroix, Fayez Hadji, Jacques Chomilier, Nikolaos Papandreou. 234-239
- Semi-supervised Learning of Alternatively Spliced Exons using Expectation Maximization Type ApproachesAna Stanescu, Doina Caragea. 240-245
- How to Deal with Small Open Reading Frames?Malgorzata Wanczyk, Pawel Blazej, Pawel Mackiewicz, Stanislaw Cebrat. 246-250
- Analysis of Correlation Structures in Renal Cell Carcinoma Patient DataItalo Zoppis, Massimiliano Borsani, Erica Gianazza, Clizia Chinello, Francesco Rocco, Giancarlo Albo, André M. Deelder, Yuri E. M. van der Burgt, Fulvio Magni, Marco Antoniotti, Giancarlo Mauri. 251-256
- Numerical Analysis of Image based High Throughput Zebrafish Infection Screens - Matching Meaning with DataAlexander E. Nezhinsky, Esther Stoop, Astrid van der Sar, Fons J. Verbeek. 257-262
- Bridging the Gap between Design and Reality - A Dual Evolutionary Strategy for the Design of Synthetic Genetic CircuitsJennifer Hallinan, S. Park, Anil Wipat. 263-268
- A Taste of Yeast MobilomicsGiulia Menconi, Giovanni Battaglia, Roberto Grossi, Nadia Pisanti, Roberto Marangoni. 271-274
- 3D Visualization of Haplotype Risk MapsSergio Torres-Sánchez, Manuel García Sánchez, Germán Arroyo, Nuria Medina-Medina, Rosana Montes-Soldado, Francisco Soler-Martínez, María M. Abad-Grau. 275-280
- Approach to Enable an Automatic Pre-processing of qRT-PCR - AnalysisMarco Franke, Klaus-Dieter Thoben, Rainer Söller. 281-285
- Identification of Hiv-1 Dynamics - Estimating the Noise Model, Constant and Time-varying Parameters of Long-term Clinical DataAndrás Hartmann, Susana Vinga, João M. Lemos. 286-289
- Abstractions for Scaling eScience Applications to Distributed Computing Environments - A StratUm Integration Case Study in Molecular Systems BiologyPer-Olov Östberg, Andreas Hellander, Brian Drawert, Erik Elmroth, Sverker Holmgren, Linda Petzold. 290-294
- Differential Evolution to Multi-objective Protein Structure PredictionSandra M. Venske, Richard A. Gonçalves, Myriam Regattieri Delgado. 295-298
- Bayesian Network Analysis of Relationships between Nucleosome Dynamics and Transcriptional Regulatory FactorsBich Hai Ho, Ngoc Tu Le, Tu Bao Ho. 299-302
- Universal k-NN (UNN) Classification of Cell Images using Histograms of DoG CoefficientsPaolo Piro, Wafa Bel Haj Ali, Lydie Crescence, Oumelkheir Ferhat, Jacques Darcourt, Thierry Pourcher, Michel Barlaud. 303-307
- Computation of the Normalized Compression Distance of DNA Sequences using a Mixture of Finite-context ModelsDiogo Pratas, Armando J. Pinho, Sara P. Garcia. 308-311
- Computational Predictions for the Nucleation Mass and Lag times Involved in Aβ42 Peptide AggregationPreetam Ghosh, Bhaswati Datta, Vijayaraghavan Rangachari. 312-316
- Multi-level Dynamic Modeling in Biological Systems - Application of Hybrid Petri Nets to Network SimulationRafael S. Costa, Daniel Machado, A. R. Neves, Susana Vinga. 317-321
- Automated Regulon Content Prediction and Estimation of PWM QualityElena D. Stavrovskaya, Andrey A. Mironov, Dmitry A. Rodionov, Inna Dubchak, Pavel S. Novichkov. 322-325
- Fuzzy Concept Lattice-based Approach for Reactive Motifs DiscoveryThanapat Kangkachit, Kitsana Waiyamai. 326-330
- A Novel Analysis Flow for Fused Transcripts Discovery from Paired-end RNA-Seq DataFrancesco Abate, Giulia Paciello, Andrea Acquaviva, Elisa Ficarra, Alberto Ferrarini, Massimo Delledonne, Enrico Macii. 331-334
- A Novel Gaussian Fitting Approach for 2D Gel Electrophoresis Saturated Protein SpotsMassimo Natale, Alfonso Caiazzo, Enrico M. Bucci, Elisa Ficarra. 335-338
- Characterization of Coarse Grain Molecular Dynamic Simulation Performance on Graphic Processing Unit ArchitecturesArdita Shkurti, Andrea Acquaviva, Elisa Ficarra, Mario Orsi, Enrico Macii. 339-342
- PubMed Dataset: A Java Library for Automatic Construction of Evaluation DatasetsKirill Lassounski, Sahudy Montenegro González, Annabell Del Real Tamariz, Gabriel Lima de Oliveira. 343-346
- Automated Detection of Interphase and Metaphase Nuclei in the FISH ImagesJan Schier, Bohumil Kovár, Eduard Kocárek. 347-350
- Appearance based Disease Recognition of Human BrainsGopi Chand Nutakki, Leyla Zhuhadar, Robert Wyatt. 351-355
- Landscaping the Framework of Bio Research Project - Generation of the 3D Atlas for Drug Target DiscoveryByung-Cheol Kim, Sunghoon Kim. 356-359
- Haplotype-based Classifiers to Predict Individual Susceptibility to Complex Diseases - An Example for Multiple SclerosisMaría M. Abad-Grau, Nuria Medina-Medina, Andrés R. Masegosa, Serafín Moral. 360-366
- Building Today the Future Cadre of Informatics-oriented Physicians - Lessons from a New Biomedical Informatics Curriculum for Medical DoctorsRonen Tal-Botzer, Rachel S. Levy-Drummer, Gidi Rechavi, Ron Unger. 371-377
- A Web-based Introduction to Bioinformatics - Epistemological Beliefs in BioinformaticsGerald Lirk, Peter Kulczycki, Stefan Winkler, Jörg Zumbach. 378-385
- eBiomics - A Website Promoting Good Practices and Specific Methods for using Bioinformatics ResourcesFrédérique Lisacek, Patrick Koks, Pascale Berthault, Grégoire Rossier, Guy Bottu, Jacques van Helden, Jean Sylvestre, Jean-Pierre Kraehenbuhl, Jack A. M. Leunissen. 386-391
- Exit Polls - Instant Feedback from Teaching Events and Conference TalksKristian Rother. 395-398