Benjamin Audit - researchr alias

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Viewing Publication 1 - 17 from 17

2024

Space-Scale Hybrid Continuous-Discrete Sliding Frank-Wolfe MethodClara Lage, Nelly Pustelnik, Jean-Michel Arbona, Benjamin Audit. spl, 31:830-834, 2024. [doi]

2023

Neural network and kinetic modelling of human genome replication reveal replication origin locations and strengthsJean-Michel Arbona, Hadi Kabalane, Jeremy Barbier, Arach Goldar, Olivier Hyrien, Benjamin Audit. ploscb, 19(5), 2023. [doi]

2017

Multi-scale structural community organisation of the human genomeRasha E. Boulos, Nicolas Tremblay, Alain Arneodo, Pierre Borgnat, Benjamin Audit. bmcbi, 18(1), 2017. [doi]

2015

Embryonic Stem Cell Specific "Master" Replication Origins at the Heart of the Loss of PluripotencyHanna Julienne, Benjamin Audit, Alain Arneodo. ploscb, 11(2), 2015. [doi]

2014

Large replication skew domains delimit GC-poor gene deserts in humanLamia Zaghloul, Guénola Drillon, Rasha E. Boulos, Françoise Argoul, Claude Thermes, Alain Arneodo, Benjamin Audit. CANDC, 53:153-165, 2014. [doi]

2013

2012

Replication Fork Polarity Gradients Revealed by Megabase-Sized U-Shaped Replication Timing Domains in Human Cell LinesAntoine Baker, Benjamin Audit, Chun-Long Chen, Benoit Moindrot, Antoine Leleu, Guillaume Guilbaud, Aurélien Rappailles, Cédric Vaillant, Arach Goldar, Fabien Mongelard, Yves D'Aubenton-Carafa, Olivier Hyrien, Claude Thermes, Alain Arneodo. ploscb, 8(4), 2012. [doi]

2011

Evidence for Sequential and Increasing Activation of Replication Origins along Replication Timing Gradients in the Human GenomeGuillaume Guilbaud, Aurélien Rappailles, Antoine Baker, Chun-Long Chen, Alain Arneodo, Arach Goldar, Yves D'Aubenton-Carafa, Claude Thermes, Benjamin Audit, Olivier Hyrien. ploscb, 7(12), 2011. [doi]

2008

Wavelet-based multifractal analysisAlain Arneodo, Benjamin Audit, Pierre Kestener, Stéphane Roux. scholarpedia, 3(3):4103, 2008. [doi]

2007

CORRIE: enzyme sequence annotation with confidence estimatesBenjamin Audit, Emmanuel D. Levy, Walter R. Gilks, Leon Goldovsky, Christos A. Ouzounis. bmcbi, 8(S-4), 2007. [doi]

2006

Large-scale analysis of the human genome: From DNA sequence analysis to the modeling of replication in higher eukaryotesAlain Arneodo, Yves D'Aubenton-Carafa, Benjamin Audit, Edward-Benedict Brodie, Samuel Nicolay, P. St-Jean, Claude Thermes, Marie Touchon, Cédric Vaillant. eusipco 2006: 1-6 [doi]

2005

2003

COmplete GENome Tracking (COGENT): A Flexible Data Environment for Computational GenomicsPaul Janssen, Anton J. Enright, Benjamin Audit, Ildefonso Cases, Leon Goldovsky, Nicola Harte, Victor Kunin, Christos A. Ouzounis. bioinformatics, 19(11):1451-1452, 2003.

2002

Wavelet-based estimators of scaling behaviorBenjamin Audit, E. Bacry, J.-F. Muzy, Alain Arneodo. TIT, 48(11):2938-2954, 2002.

Modeling the percolation of annotation errors in a database of protein sequencesWalter R. Gilks, Benjamin Audit, Daniela De Angelis, Sophia Tsoka, Christos A. Ouzounis. bioinformatics, 18(12):1641-1649, 2002.

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