Jan Kosinski - researchr alias

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Viewing Publication 1 - 8 from 8

2024

PyTME (Python Template Matching Engine): A fast, flexible, and multi-purpose template matching library for cryogenic electron microscopy dataValentin J. Maurer, Marc Siggel, Jan Kosinski. softx, 25:101636, February 2024. [doi]

2023

AGouTI-Flexible Annotation of Genomic and Transcriptomic IntervalsJan Kosinski, Marek Zywicki. ploscb, 19(10), October 2023. [doi]

AlphaPulldown - a python package for protein-protein interaction screens using AlphaFold-MultimerDingquan Yu, Grzegorz Chojnowski, Maria Rosenthal, Jan Kosinski. bioinformatics, 39(1), January 2023. [doi]

2017

RetrogeneDB-a database of plant and animal retrocopiesWojciech Rosikiewicz, Michal Kabza, Jan Kosinski, Joanna Ciomborowska-Basheer, Magdalena R. Kubiak, Izabela Makalowska. biodb, 2017, 2017. [doi]

2013

MODexplorer: an integrated tool for exploring protein sequence, structure and function relationshipsJan Kosinski, Alessandro Barbato, Anna Tramontano. bioinformatics, 29(7):953-954, 2013. [doi]

2012

Improving your target-template alignment with MODalignAlessandro Barbato, Pascal Benkert, Torsten Schwede, Anna Tramontano, Jan Kosinski. bioinformatics, 28(7):1038-1039, 2012. [doi]

2011

REPAIRtoire - a database of DNA repair pathwaysKaja Milanowska, Joanna Krwawicz, Grzegorz Papaj, Jan Kosinski, Katarzyna Poleszak, Justyna Lesiak, Ewelina Osinska, Kristian Rother, Janusz M. Bujnicki. nar, 39(Database-Issue):788-792, 2011. [doi]

2005

The PD-(D/E)XK superfamily revisited: identification of new members among proteins involved in DNA metabolism and functional predictions for domains of (hitherto) unknown functionJan Kosinski, Marcin Feder, Janusz M. Bujnicki. bmcbi, 6:172, 2005. [doi]

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