Karsten Kristiansen - researchr alias

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Viewing Publication 1 - 13 from 13

2022

The FASTQ+ format and PISAQuan Shi, Shiping Liu, Karsten Kristiansen, Longqi Liu. bioinformatics, 38(19):4639-4642, 2022. [doi]

2018

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental triosMaria Luisa Matey-Hernandez, Lasse Maretty, Jacob Malte Jensen, Bent Petersen, Jonas Andreas Sibbesen, Siyang Liu, Palle Villesen, Laurits Skov, Kirstine Belling, Christian Theil Have, José M. G. Izarzugaza, Marie Grosjean, Jette Bork-Jensen, Jakob Grove, Thomas D. Als, Shujia Huang, Yuqi Chang, Ruiqi Xu, Weijian Ye, Junhua Rao, Xiaosen Guo, Jihua Sun, Hongzhi Cao, Chen Ye, John van Beusekom, Thomas Espeseth, Esben N. Flindt, Rune M. Friborg, Anders E. Halager, Stephanie Le Hellard, Christina M. Hultman, Francesco Lescai, Shengting Li, Ole Lund, Peter Løngreen, Thomas Mailund, Ole Mors, Christian N. S. Pedersen, Thomas Sicheritz-Pontén, Patrick F. Sullivan, Ali Syed, David Westergaard, Rachita Yadav, Ning Li, Xun Xu, Torben Hansen, Anders Krogh, Lars Bolund, Thorkild I. A. Sørensen, Oluf Pedersen, Ramneek Gupta, Simon Rasmussen, Søren Besenbacher, Anders D. Børglum, Jun Wang, Hans Eiberg, Karsten Kristiansen, Mikkel Heide Schierup, Søren Brunak. bmcbi, 19(1), 2018. [doi]

2017

de novo assembly of 150 genomes from Denmark as a population referenceLasse Maretty, Jacob Malte Jensen, Bent Petersen, Jonas Andreas Sibbesen, Siyang Liu, Palle Villesen, Laurits Skov, Kirstine Belling, Christian Theil Have, José M. G. Izarzugaza, Marie Grosjean, Jette Bork-Jensen, Jakob Grove, Thomas D. Als, Shujia Huang, Yuqi Chang, Ruiqi Xu, Weijian Ye, Junhua Rao, Xiaosen Guo, Jihua Sun, Hongzhi Cao, Chen Ye, John van Beusekom, Thomas Espeseth, Esben N. Flindt, Rune M. Friborg, Anders E. Halager, Stephanie Le Hellard, Christina M. Hultman, Francesco Lescai, Shengting Li, Ole Lund, Peter Løngreen, Thomas Mailund, Maria Luisa Matey-Hernandez, Ole Mors, Christian N. S. Pedersen, Thomas Sicheritz-Pontén, Patrick F. Sullivan, Ali Syed, David Westergaard, Rachita Yadav, Ning Li, Xun Xu, Torben Hansen, Anders Krogh, Lars Bolund, Thorkild I. A. Sørensen, Oluf Pedersen, Ramneek Gupta, Simon Rasmussen, Søren Besenbacher, Anders D. Børglum, Jun Wang 0004, Hans Eiberg, Karsten Kristiansen, Søren Brunak, Mikkel Heide Schierup. nature, 548(7665):87-91, 2017. [doi]

2015

2013

in Vitro Work FlowIrene Kouskoumvekaki, Rasmus K. Petersen, Filip Fratev, Olivier Taboureau, Thomas E. Nielsen, Tudor I. Oprea, Si B. Sonne, Esben N. Flindt, Svava Ósk Jónsdóttir, Karsten Kristiansen. jcisd, 53(4):923-937, 2013. [doi]

2011

Pharmacophore-driven identification of PPARγ agonists from natural sourcesRasmus K. Petersen, Kathrine B. Christensen, Andreana N. Assimopoulou, Xavier Fretté, Vassilios P. Papageorgiou, Karsten Kristiansen, Irene Kouskoumvekaki. jcamd, 25(2):107-116, 2011. [doi]

2009

SOAP2: an improved ultrafast tool for short read alignmentRuiqiang Li, Chang Yu, Yingrui Li, Tak Wah Lam, Siu-Ming Yiu, Karsten Kristiansen, Jun Wang. bioinformatics, 25(15):1966-1967, 2009. [doi]

2008

SOAP: short oligonucleotide alignment programRuiqiang Li, Yingrui Li, Karsten Kristiansen, Jun Wang. bioinformatics, 24(5):713-714, 2008. [doi]

TreeFam: 2008 UpdateJue Ruan, Heng Li, Zhongzhong Chen, Avril Coghlan, Lachlan James M. Coin, Yiran Guo, Jean-Karim Hériché, Yafeng Hu, Karsten Kristiansen, Ruiqiang Li, Tao Liu, Alan Moses, Junjie Qin, Søren Vang, Albert J. Vilella, Abel Ureta-Vidal, Lars Bolund, Jun Wang, Richard Durbin. nar, 36(Database-Issue):735-740, 2008. [doi]

2007

PigGIS: Pig Genomic Informatics SystemJue Ruan, Yiran Guo, Heng Li, Yafeng Hu, Fei Song, Xin Huang, Karsten Kristiansen, Lars Bolund, Jun Wang. nar, 35(Database-Issue):654-657, 2007. [doi]

FGF: A web tool for Fishing Gene Family in a whole genome databaseHongkun Zheng, Junjie Shi, Xiaodong Fang, Yuan Li, Søren Vang, Wei Fan, Junyi Wang, Zhang Zhang, Wen Wang, Karsten Kristiansen, Jun Wang. nar, 35(Web-Server-Issue):121-125, 2007. [doi]

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