Michael Feig - researchr alias

researchr

You are not signed in
Sign in
Sign up

Viewing Publication 1 - 26 from 26

2023

Characterization of RNA polymerase II trigger loop mutations using molecular dynamics simulations and machine learningBercem Dutagaci, Bingbing Duan, Chenxi Qiu, Craig D. Kaplan, Michael Feig. ploscb, 19(3), March 2023. [doi]

Varying molecular interactions explain aspects of crowder-dependent enzyme function of a viral proteaseNatalia Ostrowska, Michael Feig, Joanna Trylska. ploscb, 19(4), 2023. [doi]

2021

New parallel computing algorithm of molecular dynamics for extremely huge scale biological systemsJaewoon Jung, Chigusa Kobayashi, Kento Kasahara, Cheng Tan, Akiyoshi Kuroda, Kazuo Minami, Shigeru Ishiduki, Tatsuo Nishiki, Hikaru Inoue, Yutaka Ishikawa, Michael Feig, Yuji Sugita. jcc, 42(4):231-241, 2021. [doi]

2020

Accelerating the Generalized Born with Molecular Volume and Solvent Accessible Surface Area Implicit Solvent Model Using Graphics Processing UnitsXiping Gong, Mara Chiricotto, Xiaorong Liu, Erik Nordquist, Michael Feig, Charles L. Brooks III, Jianhan Chen. jcc, 41(8):830-838, 2020. [doi]

2019

Prediction of Membrane Permeation of Drug Molecules by Combining an Implicit Membrane Model with Machine LearningStephanie A. Brocke, Alexandra Degen, Alexander D. MacKerell Jr., Bercem Dutagaci, Michael Feig. jcisd, 59(3):1147-1162, 2019. [doi]

2018

PREFMD: a web server for protein structure refinement via molecular dynamics simulationsLim Heo, Michael Feig. bioinformatics, 34(6):1063-1065, 2018. [doi]

2017

Determination of Hydrophobic Lengths of Membrane Proteins with the HDGB Implicit Membrane ModelBercem Dutagaci, Michael Feig. jcisd, 57(12):3032-3042, December 2017. [doi]

Heterogeneous dielectric generalized Born model with a van der Waals term provides improved association energetics of membrane-embedded transmembrane helicesBercem Dutagaci, Maryam Sayadi, Michael Feig. jcc, 38(16):1308-1320, 2017. [doi]

2016

2012

Molecular Dynamics Trajectory Compression with a Coarse-Grained ModelYi-Ming Cheng, Srinivasa Murthy Gopal, Sean M. Law, Michael Feig. tcbb, 9(2):476-486, 2012. [doi]

2009

2008

Prediction of protein loop conformations using multiscale modeling methods with physical energy scoring functionsMark A. Olson, Michael Feig, Charles L. Brooks III. jcc, 29(5):820-831, 2008. [doi]

Accurate prediction of protonation state as a prerequisite for reliable MM-PB(GB)SA binding free energy calculations of HIV-1 protease inhibitorsKitiyaporn Wittayanarakul, Supot Hannongbua, Michael Feig. jcc, 29(5):673-685, 2008. [doi]

Highly accurate biomolecular electrostatics in continuum dielectric environmentsY. C. Zhou, Michael Feig, G. W. Wei. jcc, 29(1):87-97, 2008. [doi]

2007

On the correlation between drug-resistant pattern of HIV-1 protease inhibitors and binding free energy and structural changesKitiyaporn Wittayanarakul, Supot Hannongbua, Michael Feig. bmcsb, 1(S-1), 2007. [doi]

2006

Balancing an accurate representation of the molecular surface in generalized born formalisms with integrator stability in molecular dynamics simulationsJana Chocholousová, Michael Feig. jcc, 27(6):719-729, 2006. [doi]

High order matched interface and boundary method for elliptic equations with discontinuous coefficients and singular sourcesYongcheng Zhou, Shan Zhao, Michael Feig, Guo-Wei Wei. jcphy, 213(1):1-30, 2006. [doi]

2004

Performance comparison of generalized born and Poisson methods in the calculation of electrostatic solvation energies for protein structuresMichael Feig, Alexey Onufriev, Michael S. Lee, Wonpil Im, David A. Case, Charles L. Brooks III. jcc, 25(2):265-284, 2004. [doi]

Extending the treatment of backbone energetics in protein force fields: Limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulationsAlexander D. MacKerell Jr., Michael Feig, Charles L. Brooks III. jcc, 25(11):1400-1415, 2004. [doi]

2003

New analytic approximation to the standard molecular volume definition and its application to generalized Born calculationsMichael S. Lee, Michael Feig, Freddie R. Salsbury Jr., Charles L. Brooks III. jcc, 24(11):1348-1356, 2003. [doi]

New analytic approximation to the standard molecular volume definition and its application to generalized born calculations - ErratumMichael S. Lee, Michael Feig, Freddie R. Salsbury Jr., Charles L. Brooks III. jcc, 24(14):1821, 2003. [doi]

1999

Large scale distributed data repository: design of a molecular dynamics trajectory databaseMichael Feig, Matin Abdullah, Lennart Johnsson, B. Montgomery Pettitt. fgcs, 16(1):101-110, 1999. [doi]

1996

Einführung in GNUMichael Feig. UNIX easy, Hanser, 1996.

All Publications

Filter by Year
OR AND NOT 1

Filter by Type
OR AND NOT 1

Filter by Tag
OR AND NOT 1

Filter by Venue
OR AND NOT 1

Filter by Author

[+]
OR AND NOT 1

Filter by Top Terms

[+]
OR AND NOT 1

Researchr

Publications by 'Michael Feig'

Viewing Publication 1 - 26 from 26

2023

2021

2020

2019

2018

2017

2016

2012

2009

2008

2007

2006

2004

2003

1999

1996

All Publications

Filter by YearOR AND NOT 1

Filter by TypeOR AND NOT 1

Filter by TagOR AND NOT 1

Filter by VenueOR AND NOT 1

Filter by Author [+]OR AND NOT 1

Filter by Top Terms [+]OR AND NOT 1

Researchr

Publications by 'Michael Feig'

Viewing Publication 1 - 26 from 26

2023

2021

2020

2019

2018

2017

2016

2012

2009

2008

2007

2006

2004

2003

1999

1996

Filter by Year
OR AND NOT 1

Filter by Type
OR AND NOT 1

Filter by Tag
OR AND NOT 1

Filter by Venue
OR AND NOT 1

Filter by Author

[+]
OR AND NOT 1

Filter by Top Terms

[+]
OR AND NOT 1