Patricia Buendia - researchr alias

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Viewing Publication 1 - 12 from 12

2015

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)Bjoern H. Menze, Andras Jakab, Stefan Bauer, Jayashree Kalpathy-Cramer, Keyvan Farahani, Justin Kirby, Yuliya Burren, Nicole Porz, Johannes Slotboom, Roland Wiest, Levente Lanczi, Elizabeth R. Gerstner, Marc-André Weber, Tal Arbel, Brian B. Avants, Nicholas Ayache, Patricia Buendia, D. Louis Collins, Nicolas Cordier, Jason J. Corso, Antonio Criminisi, Tilak Das, Herve Delingette, Çagatay Demiralp, Christopher R. Durst, Michel Dojat, Senan Doyle, Joana Festa, Florence Forbes, Ezequiel Geremia, Ben Glocker, Polina Golland, Xiaotao Guo, Andac Hamamci, Khan M. Iftekharuddin, Raj Jena, Nigel M. John, Ender Konukoglu, Danial Lashkari, José Antonio Mariz, Raphael Meier, Sérgio Pereira, Doina Precup, Stephen J. Price, Tammy Riklin-Raviv, Syed M. S. Reza, Michael T. Ryan, Duygu Sarikaya, Lawrence H. Schwartz, Hoo-Chang Shin, Jamie Shotton, Carlos A. Silva, Nuno Sousa, Nagesh K. Subbanna, Gábor Székely, Thomas J. Taylor, Owen M. Thomas, Nicholas J. Tustison, Gözde B. Ünal, Flor Vasseur, Max Wintermark, Dong Hye Ye, Liang Zhao, Binsheng Zhao, Darko Zikic, Marcel Prastawa, Mauricio Reyes, Koen Van Leemput. tmi, 34(10):1993-2024, 2015. [doi]

2012

Cancer Data Integration and Querying with GeneTegraE. Patrick Shironoshita, Yves R. Jean-Mary, Ray M. Bradley, Patricia Buendia, Mansur R. Kabuka. dils 2012: 56-70 [doi]

2011

From ESTs to ESRs: Comparative analysis of mutually exclusive exons in 15 species of insectsPatricia Buendia, Shu-Ning Hsu, Akira Chiba, John Tyree, Robert Loredo. iccabs 2011: 46-51 [doi]

2009

A phylogenetic and Markov model approach for the reconstruction of mutational pathways of drug resistancePatricia Buendia, Brice Cadwallader, Victor DeGruttola. bioinformatics, 25(19):2522-2529, 2009. [doi]

Serial evolutionary networks of within-patient HIV-1 sequences reveal patterns of evolution of X4 strainsPatricia Buendia, Giri Narasimhan. bmcsb, 3:62, 2009. [doi]

2008

The role of internal node sequences and the molecular clock in the analysis of serially-sampled dataPatricia Buendia, Timothy M. Collins, Giri Narasimhan. ijbra, 4(1):107-121, 2008. [doi]

2007

Reconstructing Mutational Pathways from Serial Evolutionary TreesPatricia Buendia. bibe 2007: 815-820 [doi]

Searching for Recombinant Donors in a Phylogenetic Network of Serial SamplesPatricia Buendia, Giri Narasimhan. isbra 2007: 109-120 [doi]

Sliding MinPD: building evolutionary networks of serial samples via an automated recombination detection approachPatricia Buendia, Giri Narasimhan. bioinformatics, 23(22):2993-3000, 2007. [doi]

2006

Reconstructing Ancestor-Descendant Lineages from Serially-Sampled Data: A Comparison StudyPatricia Buendia, Timothy M. Collins, Giri Narasimhan. iccS 2006: 807-814 [doi]

Serial NetEvolve: a flexible utility for generating serially-sampled sequences along a tree or recombinant networkPatricia Buendia, Giri Narasimhan. bioinformatics, 22(18):2313-2314, 2006. [doi]

2004

MinPD: Distance-Based Phylogenetic Analysis and Recombination Detection of Serially-Sampled HIV QuasispeciesPatricia Buendia, Giri Narasimhan. csb 2004: 110-119 [doi]

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