William R. Pearson - researchr alias

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Viewing Publication 1 - 23 from 23

2014

The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymesNicholas Furnham, Gemma L. Holliday, Tjaart A. P. de Beer, Julius O. B. Jacobsen, William R. Pearson, Janet M. Thornton. nar, 42(Database-Issue):485-489, 2014. [doi]

2013

Adjusting scoring matrices to correct overextended alignmentsLauren J. Mills, William R. Pearson. bioinformatics, 29(23):3007-3013, 2013. [doi]

2012

MACiE: exploring the diversity of biochemical reactionsGemma L. Holliday, Claudia Andreini, Julia D. Fischer, Syed Asad Rahman, Daniel E. Almonacid, Sophie T. Williams, William R. Pearson. nar, 40(Database-Issue):783-789, 2012. [doi]

PSI-Search: iterative HOE-reduced profile SSEARCH searchingWeizhong Li, Hamish McWilliam, Mickael Goujon, Andrew Cowley, Rodrigo Lopez, William R. Pearson. bioinformatics, 28(12):1650-1651, 2012. [doi]

2010

RefProtDom: a protein database with improved domain boundaries and homology relationshipsMileidy W. Gonzalez, William R. Pearson. bioinformatics, 26(18):2361-2362, 2010. [doi]

Globally, unrelated protein sequences appear randomDaniel T. Lavelle, William R. Pearson. bioinformatics, 26(3):310-318, 2010. [doi]

Improving pairwise sequence alignment accuracy using near-optimal protein sequence alignmentsMichael L. Sierk, Michael E. Smoot, Ellen J. Bass, William R. Pearson. bmcbi, 11:146, 2010. [doi]

2005

A system for visualizing and analyzing near-optimal protein sequence alignmentsMichael E. Smoot, Ellen J. Bass, Stephanie Guerlain, William R. Pearson. ivs, 4(3):224-237, 2005. [doi]

2004

Visualization of near-optimal sequence alignmentsMichael E. Smoot, Stephanie Guerlain, William R. Pearson. bioinformatics, 20(6):953-958, 2004. [doi]

2003

CRP: Cleavage of Radiolabeled PhosphoproteinsAaron J. Mackey, Timothy A. J. Haystead, William R. Pearson. nar, 31(13):3859-3861, 2003.

2002

Empirical determination of effective gap penalties for sequence comparisonJ. T. Reese, William R. Pearson. bioinformatics, 18(11):1500-1507, 2002.

2001

Training for bioinformatics and computational biologyWilliam R. Pearson. bioinformatics, 17(9):761-762, 2001.

1997

Aligning a DNA Sequence with a Protein SequenceZheng Zhang 0004, William R. Pearson, Webb Miller. jcb, 4(3):339-350, 1997.

Aligning a DNA sequence with a protein sequenceZheng Zhang 0004, William R. Pearson, Webb Miller. recomb 1997: 337-343 [doi]

Identifying distantly related protein sequencesWilliam R. Pearson. bioinformatics, 13(4):325-332, 1997.

1996

On the Primer Selection Problem in Polymerase Chain Reaction ExperimentsWilliam R. Pearson, Gabriel Robins, Dallas E. Wrege, Tongtong Zhang. DAM, 71(1-3):231-246, 1996. [doi]

1995

A New Approach to Primer Selection in Polymerase Chain Reaction ExperimentsWilliam R. Pearson, Gabriel Robins, Dallas E. Wrege, Tongtong Zhang. ismb 1995: 285-291

1994

White Paper: Designing Medical Informatics Research and Library-Resource Projects to Increase What Is LearnedWilliam W. Stead, R. Brian Haynes, Sherrilynne S. Fuller, Charles P. Friedman, Larry E. Travis, J. Robert Beck, Carol H. Fenichel, B. Chandrasekaran, Bruce G. Buchanan, Enrique E. Abola, MaryEllen C. Sievert, Reed M. Gardner, Judith Messerle, Conrade C. Jaffe, William R. Pearson, Robert M. Abarbanel. jamia, 1(1):28-33, 1994. [doi]

1993

No pain and gain! - experiences with Mentat on a biological applicationAndrew S. Grimshaw, Emily A. West, William R. Pearson. concurrency, 5(4):309-328, 1993. [doi]

1992

Aligning two sequences within a specified diagonal bandKun-Mao Chao, William R. Pearson, Webb Miller. bioinformatics, 8(5):481-487, 1992.

No Pain and Gain - Experiences with Mentat on a Biological ApplicationAndrew S. Grimshaw, Emily A. West, William R. Pearson. hpdc 1992: 57-66

Comparing machine-independent versus machine-specific parallelization of a software platform for biological sequence comparisonPerry L. Miller, Prakash M. Nadkarni, William R. Pearson. bioinformatics, 8(2):167-175, 1992.

1991

A platform for biological sequence comparison on parallel computersA. S. Deshpande, D. S. Richards, William R. Pearson. bioinformatics, 7(2):237-247, 1991.

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