Xubo Tang - researchr alias

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Viewing Publication 1 - 8 from 8

2023

VirBot: an RNA viral contig detector for metagenomic dataGuowei Chen, Xubo Tang, Mang Shi, Yanni Sun. bioinformatics, 39(3), March 2023. [doi]

PhaGenus: genus-level classification of bacteriophages using a Transformer modelJiaojiao Guan, Cheng Peng, Jiayu Shang, Xubo Tang, Yanni Sun. bib, 24(6), September 2023. [doi]

HOTSPOT: hierarchical host prediction for assembled plasmid contigs with transformerYongxin Ji, Jiayu Shang, Xubo Tang, Yanni Sun. bioinformatics, 39(5), May 2023. [doi]

PhaTYP: predicting the lifestyle for bacteriophages using BERTJiayu Shang, Xubo Tang, Yanni Sun. bib, 24(1), January 2023. [doi]

PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision TransformerJiayu Shang, Cheng Peng, Xubo Tang, Yanni Sun. bioinformatics, 39(Supplement-1):30-39, 2023. [doi]

2022

Accurate identification of bacteriophages from metagenomic data using TransformerJiayu Shang, Xubo Tang, Ruocheng Guo, Yanni Sun. bib, 23(4), 2022. [doi]

RdRp-based sensitive taxonomic classification of RNA viruses for metagenomic dataXubo Tang, Jiayu Shang, Yanni Sun. bib, 23(2), 2022. [doi]

2019

Fast and accurate microRNA search using CNNXubo Tang, Yanni Sun. bmcbi, 20-S(23):646, 2019. [doi]

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runs on WebDSL