Journal: Bioinformatics

Volume 16, Issue 11

953 -- 959Michael Z. Man, Xuning Wang, Yixin Wang. POWER_SAGE: comparing statistical tests for SAGE experiments
960 -- 967Tetsuo Nishikawa, Toshio Ota, Takao Isogai. Prediction whether a human cDNA sequence contains initiation codon by combining statistical information and similarity with protein sequences
968 -- 977Ana Tereza R. Vasconcelos, Marco A. Grivet Mattoso Maia, Darcy F. de Almeida. Short interrupted palindromes on the extragenic DNA of Escherichia coli K-12, Haemophilus influenzae and Neisseria meningitidis
978 -- 987Jong Park, Sabine Dietmann, Andreas Heger, Liisa Holm. Estimating the significance of sequence order in protein secondary structure and prediction
988 -- 1002Anders Wallqvist, Yoshifumi Fukunishi, Lynne Reed Murphy, Addi Fadel, Ronald M. Levy. Iterative sequence/secondary structure search for protein homologs: comparison with amino acid sequence alignments and application to fold recognition in genome databases
1003 -- 1009Derek A. Ruths, Edward S. Chen, Leland Ellis. Arbor 3D: an interactive environment for examining phylogenetic and taxonomic trees in multiple dimensions
1010 -- 1013Simon P. Blomberg. Fels-Rand: an Xlisp-Stat program for the comparative analysis of data under phylogenetic uncertainty
1014 -- 1022Tim Beißbarth, Kurt Fellenberg, Benedikt Brors, R. Arribas-Prat, J. M. Boer, Nicole C. Hauser, Marcel Scheideler, Jörg D. Hoheisel, G. Schütz, Annemarie Poustka, Martin Vingron. Processing and quality control of DNA array hybridization data
1023 -- 1037Eberhard O. Voit, Tomas Radivoyevitch. Biochemical systems analysis of genome-wide expression data
1038 -- 1039Christopher M. L. S. Bouton, Jonathan Pevsner. DRAGON: Database Referencing of Array Genes Online
1040 -- 1041Joseph A. Bedell, Ian Korf, Warren Gish. MaskerAid : a performance enhancement to RepeatMasker
1042 -- 1043Roderic D. M. Page. Circles: automating the comparative analysis of RNA secondary structure
1044 -- 1045Kristian Vlahovicek, Sándor Pongor. model.it : building three dimensional DNA models from sequence data
1046 -- 1047Chris Mayor, Michael Brudno, Jody R. Schwartz, Alexander Poliakov, Edward M. Rubin, Kelly A. Frazer, Lior Pachter, Inna Dubchak. VISTA : visualizing global DNA sequence alignments of arbitrary length
1048 -- 1049Paul Kersey, Henning Hermjakob, Rolf Apweiler. VARSPLIC: alternatively-spliced protein sequences derived from SWISS-PROT and TrEMBL
1052 -- 1053Ian Korf, Warren Gish. MPBLAST : improved BLAST performance with multiplexed queries
1054 -- 1055Matthew Boone, Chris Upton. BLAST Search Updater: a notification system for new database matches
1056 -- 1058Jeong-Hyeon Choi, Ho-Youl Jung, Hye Sun Kim, Hwan-Gue Cho. PhyloDraw: a phylogenetic tree drawing system