Sándor Pongor - researchr alias

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Viewing Publication 1 - 44 from 44

2022

Microsimulation based quantitative analysis of COVID-19 management strategiesIstván Z. Reguly, Dávid Csercsik, János Juhász, Kálmán Tornai, Zsófia Bujtár, Gergely Horváth, Bence Keömley-Horváth, Tamás Kós, György Cserey, Kristóf Iván, Sándor Pongor, Gábor Szederkényi, Gergely Röst, Attila Csikász-Nagy. ploscb, 18(1), 2022. [doi]

2021

COVIDOUTCOME - estimating COVID severity based on mutation signatures in the SARS-CoV-2 genomeÁdám Nagy, Balázs Ligeti, János Szebeni, Sándor Pongor, Balazs Györffy. biodb, 2021, 2021. [doi]

2019

TPMCalculator: one-step software to quantify mRNA abundance of genomic featuresRoberto Vera Alvarez, Sándor Pongor, Leonardo Mariño-Ramírez, David Landsman. bioinformatics, 35(11):1960-1962, 2019. [doi]

2015

Multi-netclust: an efficient tool for finding connected clusters in multi-parametric networksArnold Kuzniar, Somdutta Dhir, Harm Nijveen, Sándor Pongor, Jack A. M. Leunissen. bioinformatics, 31(19):3240, 2015. [doi]

2014

PTMTreeSearch: a novel two-stage tree-search algorithm with pruning rules for the identification of post-translational modification of proteins in MS/MS spectraAttila Kertész-Farkas, Beáta Reiz, Roberto Vera, Michael P. Myers, Sándor Pongor. bioinformatics, 30(2):234-241, 2014. [doi]

2013

How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public healthVladimir A. Kuznetsov, Hwee Kuan Lee, Sebastian Maurer-Stroh, Maria Judit Molnár, Sándor Pongor, Birgit Eisenhaber, Frank Eisenhaber. hisas, 1(1):2, 2013. [doi]

Predicting effective drug combinations via network propagationBalázs Ligeti, Roberto Vera, Gergely Lukács, Balazs Györffy, Sándor Pongor. biocas 2013: 378-381 [doi]

Obituary: In memory of Jack LeunissenJingchu Luo, Harm Nijveen, Teresa K. Attwood, David Phillip Judge, Sándor Pongor, David Landsman, Martin Bishop. bib, 14(3):261-262, 2013. [doi]

Chemical rule-based filtering of MS/MS spectraBeáta Reiz, Attila Kertész-Farkas, Sándor Pongor, Michael P. Myers. bioinformatics, 29(7):925-932, 2013. [doi]

JBioWH: an open-source Java framework for bioinformatics data integrationRoberto Vera, Yasset Pérez-Riverol, Sonia Pérez, Balázs Ligeti, Attila Kertész-Farkas, Sándor Pongor. biodb, 2013, 2013. [doi]

2012

2011

PTMSearch: A Greedy Tree Traversal Algorithm for Finding Protein Post-Translational Modifications in Tandem Mass SpectraAttila Kertész-Farkas, Beáta Reiz, Michael P. Myers, Sándor Pongor. pkdd 2011: 162-176 [doi]

Psychologically Inspired, Rule-Based Outlier Detection in Noisy DataBeáta Reiz, Sándor Pongor. synasc 2011: 131-136 [doi]

2010

2008

Tree-Based Algorithms for Protein ClassificationRóbert Busa-Fekete, András Kocsor, Sándor Pongor. In Arpad Kelemen, Ajith Abraham, Yuehui Chen, editors, Computational Intelligence in Bioinformatics. Volume 94 of Studies in Computational Intelligence, pages 165-182, Springer, 2008. [doi]

Analysis of Kernel Based Protein Classification Strategies Using Pairwise Sequence Alignment MeasuresDino Franklin, Somdutta Dhir, Sándor Pongor. cibb 2009: 222-231 [doi]

ROC analysis: applications to the classification of biological sequences and 3D structuresPaolo Sonego, András Kocsor, Sándor Pongor. bib, 9(3):198-209, 2008. [doi]

Fast protein fold estimation from NMR-derived distance restraintsAnnamária F. Ángyán, András Perczel, Sándor Pongor, Zoltán Gáspári. bioinformatics, 24(2):272-275, 2008. [doi]

2007

Equivalence Learning in Protein ClassificationAttila Kertész-Farkas, András Kocsor, Sándor Pongor. mldm 2007: 824-837 [doi]

A Protein Classification Benchmark collection for machine learningPaolo Sonego, Mircea Pacurar, Somdutta Dhir, Attila Kertész-Farkas, András Kocsor, Zoltán Gáspári, Jack A. M. Leunissen, Sándor Pongor. nar, 35(Database-Issue):232-236, 2007. [doi]

2006

Application of a simple likelihood ratio approximant to protein sequence classificationLászló Kaján, Attila Kertész-Farkas, Dino Franklin, Neli Ivanova, András Kocsor, Sándor Pongor. bioinformatics, 22(23):2865-2869, 2006. [doi]

Application of compression-based distance measures to protein sequence classification: a methodological studyAndrás Kocsor, Attila Kertész-Farkas, László Kaján, Sándor Pongor. bioinformatics, 22(4):407-412, 2006. [doi]

2005

2003

IS: a web-site for intron statisticsEndre Barta, László Kaján, Sándor Pongor. bioinformatics, 19(4):543-543, 2003.

DPX: for the analysis of the protein coreAlessandro Pintar, Oliviero Carugo, Sándor Pongor. bioinformatics, 19(2):313-314, 2003.

The SBASE domain sequence library, release 10: domain architecture predictionKristian Vlahovicek, László Kaján, János Murvai, Zoltán Hegeds, Sándor Pongor. nar, 31(1):403-405, 2003.

DNA analysis servers: plot.it, bend.it, model.it and ISKristian Vlahovicek, László Kaján, Sándor Pongor. nar, 31(13):3686-3687, 2003.

2002

CX, an algorithm that identifies protruding atoms in proteinsAlessandro Pintar, Oliviero Carugo, Sándor Pongor. bioinformatics, 18(7):980-984, 2002.

The SBASE protein domain library, release 9.0: an online resource for protein domain identificationKristian Vlahovicek, János Murvai, Endre Barta, Sándor Pongor. nar, 30(1):273-275, 2002.

2001

The SBASE protein domain library, release 8.0: a collection of annotated protein sequence segmentsJános Murvai, Kristian Vlahovicek, Endre Barta, Sándor Pongor. nar, 29(1):58-60, 2001.

2000

The SBASE protein domain library, release 7.0: a collection of annotated protein sequence segmentsJános Murvai, Kristian Vlahovicek, Endre Barta, Bruno Cataletto, Sándor Pongor. nar, 28(1):260-262, 2000.

A simple probabilistic scoring method for protein domain identificationJános Murvai, Kristian Vlahovicek, Sándor Pongor. bioinformatics, 16(12):1155-1156, 2000.

model.it : building three dimensional DNA models from sequence dataKristian Vlahovicek, Sándor Pongor. bioinformatics, 16(11):1044-1045, 2000.

1999

The domain-server: direct prediction of protein domain-homologies from BLAST searchJános Murvai, Kristian Vlahovicek, Endre Barta, S. Parthasarathy, Hedvig Hegyi, Friedhelm Pfeiffer, Sándor Pongor. bioinformatics, 15(4):343-344, 1999.

The SBASE protein domain library, release 6.0: a collection of annotated protein sequence segmentsJános Murvai, Kristian Vlahovicek, Endre Barta, Csaba Szepesvári, Cristina Acatrinei, Sándor Pongor. nar, 27(1):257-259, 1999.

1997

The SBASE protein domain library, release 5.0: a collection of annotated protein sequence segmentsPéter Fábián, János Murvai, Zsolt Hátsági, Kristian Vlahovicek, Hedvig Hegyi, Sándor Pongor. nar, 25(1):240-243, 1997.

1996

The SBASE protein domain library, Release 4.0: a collection of annotated protein sequence segmentsJános Murvai, Andrei E. Gabrielian, Péter Fábián, Zsolt Hátsági, Kirill Degtyarenko, Hedvig Hegyi, Sándor Pongor. nar, 24(1):210-213, 1996.

1994

Protein Motifs: Towards a Unified View on DatabasesZsolt Hátsági, Vesna Skerl, Sándor Pongor. hicss 1994: 255-264

1993

Predicting potential domain homologies from FASTA search resultsHedvig Hegyi, Sándor Pongor. bioinformatics, 9(3):371-372, 1993.

The SBASE protein domain library, release 2.0: a collection of annotated protein sequence segmentsSándor Pongor, Vesna Skerl, Miklós Cserzo, Zsolt Hátsági, György Simon, Valeria Bevilacqua. nar, 21(13):3111-3115, 1993.

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