| 2 | -- | 0 | Alex Bateman. Bioinformatics - The new home for protein sequence motifs |
| 3 | -- | 6 | Dorit Amikam, Michael Y. Galperin. PilZ domain is part of the bacterial c-di-GMP binding protein |
| 7 | -- | 12 | Nusrat Rabbee, Terence P. Speed. A genotype calling algorithm for affymetrix SNP arrays |
| 13 | -- | 20 | Miao Zhang, Warren Gish. Improved spliced alignment from an information theoretic approach |
| 21 | -- | 28 | Kyle L. Jensen, Mark P. Styczynski, Isidore Rigoutsos, Gregory Stephanopoulos. A generic motif discovery algorithm for sequential data |
| 29 | -- | 34 | Weichun Huang, David M. Umbach, Leping Li. Accurate anchoring alignment of divergent sequences |
| 35 | -- | 39 | Zasha Weinberg, Walter L. Ruzzo. Sequence-based heuristics for faster annotation of non-coding RNA families |
| 40 | -- | 49 | Yohan Kim, Mehmet Koyutürk, Umut Topkara, Ananth Grama, Shankar Subramaniam. Inferring functional information from domain co-evolution |
| 50 | -- | 57 | Marta Blangiardo, Simona Toti, Betti Giusti, Rosanna Abbate, Alberto Magi, Filippo Poggi, Luciana Rossi, Francesca Torricelli, Annibale Biggeri. Using a calibration experiment to assess gene-specific information: full Bayesian and empirical Bayesian models for two-channel microarray data |
| 58 | -- | 67 | Thomas Grotkjær, Ole Winther, Birgitte Regenberg, Jens Nielsen, Lars Kai Hansen. Robust multi-scale clustering of large DNA microarray datasets with the consensus algorithm |
| 68 | -- | 76 | Xiaoyan Leng, Hans-Georg Müller. Classification using functional data analysis for temporal gene expression data |
| 77 | -- | 87 | Yongxi Tan, Leming M. Shi, Saber M. Hussain, Jun Xu, Weida Tong, John M. Frazier, Charles Wang. Integrating time-course microarray gene expression profiles with cytotoxicity for identification of biomarkers in primary rat hepatocytes exposed to cadmium |
| 88 | -- | 95 | Hao Helen Zhang, Jeongyoun Ahn, Xiaodong Lin, Cheolwoo Park. Gene selection using support vector machines with non-convex penalty |
| 96 | -- | 102 | Huai Li, Ming Zhan. Systematic intervention of transcription for identifying network response to disease and cellular phenotypes |
| 103 | -- | 105 | Hongfang Liu, Zhang-Zhi Hu, Jian Zhang, Cathy H. Wu. BioThesaurus: a web-based thesaurus of protein and gene names |
| 106 | -- | 111 | Ismael Navas Delgado, Maria del Mar Rojano-Muñoz, Sergio Ramírez, Antonio Jesús Pérez, Eduardo Andrés León, José Francisco Aldana Montes, Oswaldo Trelles. Intelligent client for integrating bioinformatics services |
| 112 | -- | 114 | Åsa Pérez-Bercoff, Johan Koch, Thomas R. Bürglin. LogoBar: bar graph visualization of protein logos with gaps |
| 115 | -- | 116 | Colas Schretter, Michel C. Milinkovitch. OligoFaktory: a visual tool for interactive oligonucleotide design |
| 117 | -- | 119 | Tom M. W. Nye, Pietro Liò, Walter R. Gilks. A novel algorithm and web-based tool for comparing two alternative phylogenetic trees |
| 120 | -- | 121 | Vivek Gopalan, Wei-Gang Qiu, Michael Z. Chen, Arlin Stoltzfus. Nexplorer: phylogeny-based exploration of sequence family data |
| 122 | -- | 123 | Alan R. Dabney. ClaNC: point-and-click software for classifying microarrays to nearest centroids |
| 124 | -- | 126 | Xinglai Ji, Ying Xu. libSRES: a C library for stochastic ranking evolution strategy for parameter estimation |