Journal: Bioinformatics

Volume 26, Issue 16

1927 -- 1931Klaus O. Kopec, Vikram Alva, Andrei N. Lupas. Homology of SMP domains to the TULIP superfamily of lipid-binding proteins provides a structural basis for lipid exchange between ER and mitochondria
1932 -- 1937Mark E. T. Horn, Peter M. Waterhouse. Rapid match-searching for gene silencing assessment
1938 -- 1944Marc Fiume, Vanessa Williams, Andrew Brook, Michael Brudno. Savant: genome browser for high-throughput sequencing data
1945 -- 1949Ari B. Kahn, Barry Zeeberg, Michael C. Ryan, D. Curtis Jamison, David M. Rockoff, Yves Pommier, John N. Weinstein. Ontogenomic study of the relationship between number of gene splice variants and GO categorization
1950 -- 1957Yin Hu, Kai Wang, Xiaping He, Derek Y. Chiang, Jan F. Prins, Jinze Liu. A probabilistic framework for aligning paired-end RNA-seq data
1958 -- 1964Yongchao Liu, Bertil Schmidt, Douglas L. Maskell. MSAProbs: multiple sequence alignment based on pair hidden Markov models and partition function posterior probabilities
1965 -- 1974Thomas C. Freeman Jr., William C. Wimley. A highly accurate statistical approach for the prediction of transmembrane beta-barrels
1975 -- 1982Fuxiao Xin, Steven Myers, Yong Fuga Li, David N. Cooper, Sean D. Mooney, Predrag Radivojac. Structure-based kernels for the prediction of catalytic residues and their involvement in human inherited disease
1983 -- 1989Xinping Cui, Na You, Thomas Girke, Richard Michelmore, Allen Van Deynze. Single feature polymorphism detection using recombinant inbred line microarray expression data
1990 -- 1998Monika Jelizarow, Vincent Guillemot, Arthur Tenenhaus, Korbinian Strimmer, Anne-Laure Boulesteix. Over-optimism in bioinformatics: an illustration
1999 -- 2003Taane G. Clark, Susana G. Campino, Elisa Anastasi, Sarah Auburn, Yik Y. Teo, Kerrin S. Small, Kirk A. Rockett, Dominic Kwiatkowski, Christopher C. Holmes. A Bayesian approach using covariance of single nucleotide polymorphism data to detect differences in linkage disequilibrium patterns between groups of individuals
2004 -- 2011John M. O. Ranola, Sangtae Ahn, Mary E. Sehl, Desmond J. Smith, Kenneth Lange. A Poisson model for random multigraphs
2012 -- 2019Pablo Carbonell, Jean-Loup Faulon. Molecular signatures-based prediction of enzyme promiscuity
2020 -- 2028Tong Zhou, Ya-Li Wang. Causal relationship inference for a large-scale cellular network
2029 -- 2036Kresimir Letinic, Rafael Sebastián, Andrew Barthel, Derek Toomre. Deciphering subcellular processes in live imaging datasets via dynamic probabilistic networks
2037 -- 2041Yi Ming Zou. Modeling and analyzing complex biological networks incooperating experimental information on both network topology and stable states
2042 -- 2050Tamás Korcsmáros, Illés J. Farkas, Mate S. Szalay, Petra Rovó, Dávid Fazekas, Zoltán Spiró, Csaba Böde, Katalin Lenti, Tibor Vellai, Peter Csermely. Uniformly curated signaling pathways reveal tissue-specific cross-talks and support drug target discovery
2051 -- 2052Fengfeng Zhou, Ying Xu. cBar: a computer program to distinguish plasmid-derived from chromosome-derived sequence fragments in metagenomics data
2053 -- 2054Eduardo Gorrón, Fausto Rodríguez, Diana Bernal, Luis Miguel Rodriguez-Rojas, Adriana Bernal, Silvia Restrepo, Joe Tohme. A new method for designing degenerate primers and its use in the identification of sequences in ::::Brachiaria:::: showing similarity to apomixis-associated genes
2055 -- 2056Alexey S. Kondrashov, Raquel Assis. Bridges: a tool for identifying local similarities in long sequences
2057 -- 2059Fabrice Jossinet, Thomas E. Ludwig, Eric Westhof. Assemble: an interactive graphical tool to analyze and build RNA architectures at the 2D and 3D levels
2060 -- 2061Jose M. G. Vilar, Leonor Saiz. Mathematica package to study macromolecular-assembly control of gene expression
2062 -- 2063Andreas Lüscher, Gábor Csárdi, Aitana Morton de Lachapelle, Zoltan Kutalik, Bastian Peter, Sven Bergmann. ExpressionView - an interactive viewer for modules identified in gene expression data
2064 -- 2065Gregory Ewing, Joachim Hermisson. ::::MSMS::::: a coalescent simulation program including recombination, demographic structure and selection at a single locus
2066 -- 2068Ivan Dimitrov, Panayot Garnev, Darren R. Flower, Irini A. Doytchinova. EpiTOP - a proteochemometric tool for MHC class II binding prediction
2069 -- 2070William M. McLaren, Bethan Pritchard, Daniel Rios, Yuan Chen, Paul Flicek, Fiona Cunningham. Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor