| 2651 | -- | 2655 | A. Robbins-Pianka, M. D. Rice, M. P. Weir. The mRNA landscape at yeast translation initiation sites |
| 2656 | -- | 2663 | Marco Mariotti, Roderic Guigó. Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes |
| 2664 | -- | 2671 | Daniel Chubb, Benjamin R. Jefferys, Michael J. E. Sternberg, Lawrence A. Kelley. Sequencing delivers diminishing returns for homology detection: implications for mapping the protein universe |
| 2672 | -- | 2677 | Gurmukh Sahota, Gary D. Stormo. Novel sequence-based method for identifying transcription factor binding sites in prokaryotic genomes |
| 2678 | -- | 2683 | Bo Liao, Benyou Liao, Xingming Sun, Qingguang Zeng. A Novel method for similarity analysis and protein sub-cellular localization prediction |
| 2684 | -- | 2688 | Haley J. Abel, Eric J. Duncavage, Nils Becker, Jon R. Armstrong, Vincent J. Magrini, John D. Pfeifer. SLOPE: a quick and accurate method for locating non-SNP structural variation from targeted next-generation sequence data |
| 2689 | -- | 2697 | Ryan R. Rahrig, Neocles Leontis, Craig L. Zirbel. R3D Align: global pairwise alignment of RNA 3D structures using local superpositions |
| 2698 | -- | 2704 | Tsuyoshi Kato, Nozomi Nagano. Metric learning for enzyme active-site search |
| 2705 | -- | 2712 | Paul David McNicholas, Thomas Brendan Murphy. Model-based clustering of microarray expression data via latent Gaussian mixture models |
| 2713 | -- | 2720 | Leo Lahti, Juha E. A. Knuuttila, Samuel Kaski. Global modeling of transcriptional responses in interaction networks |
| 2721 | -- | 2730 | Stefano Moretti, Vito Fragnelli, Fioravante Patrone, Stefano Bonassi. Using coalitional games on biological networks to measure centrality and power of genes |
| 2731 | -- | 2736 | Ilya Papatsenko, Mike Levine, Dmitri A. Papatsenko. Temporal waves of coherent gene expression during ::::Drosophila:::: embryogenesis |
| 2737 | -- | 2743 | Iziah Edwin Sama, Martijn A. Huynen. Measuring the physical cohesiveness of proteins using physical interaction enrichment |
| 2744 | -- | 2751 | Zhuhong You, Ying-Ke Lei, Jie Gui, De-Shuang Huang, Xiaobo Zhou. Using manifold embedding for assessing and predicting protein interactions from high-throughput experimental data |
| 2752 | -- | 2759 | Aleksandar Stojmirovic, Yi-Kuo Yu. Robust and accurate data enrichment statistics via distribution function of sum of weights |
| 2760 | -- | 2766 | Thora Pommerencke, Kathi Westphal, Claudia Ernst, Kai Safferling, Hartmut Dickhaus, Thorsten Steinberg, Pascal Tomakidi, Niels Grabe. Spatial quantification and classification of skin response following perturbation using organotypic skin cultures |
| 2767 | -- | 2775 | Rezarta Islamaj Dogan, Zhiyong Lu. Click-words: learning to predict document keywords from a user perspective |
| 2776 | -- | 2777 | Sebastian Zöllner. CopyMap: localization and calling of copy number variation by joint analysis of hybridization data from multiple individuals |
| 2778 | -- | 2779 | Leo Goodstadt. Ruffus: a lightweight Python library for computational pipelines |
| 2782 | -- | 2783 | Paul R. Staab, Jörg Walossek, David Nellessen, Raik Grünberg, Katja M. Arndt, Kristian M. Müller. SynBioWave - a real-time communication platform for molecular and synthetic biology |
| 2784 | -- | 2785 | Manuel Rueda, Vsevolod Katritch, Eugene Raush, Ruben Abagyan. SimiCon: a web tool for protein-ligand model comparison through calculation of equivalent atomic contacts |
| 2786 | -- | 2787 | Jose-Roman Bilbao-Castro, Carlos Oscar Sánchez Sorzano, Inmaculada García, José-Jesús Fernández. XMSF: Structure-preserving noise reduction and pre-segmentation in microscope tomography |
| 2788 | -- | 2789 | James Long, Chris Hartman. ODES: an overlapping dense sub-graph algorithm |
| 2792 | -- | 2793 | Elana J. Fertig, Jie Ding, Alexander V. Favorov, Giovanni Parmigiani, Michael F. Ochs. CoGAPS: an R/C++ package to identify patterns and biological process activity in transcriptomic data |
| 2794 | -- | 2795 | Si-Yuan Shen, Frank T. Bergmann, Herbert M. Sauro. SBML2TikZ: supporting the SBML render extension in LaTeX |
| 2796 | -- | 2797 | Konstantin Pentchev, Keiichiro Ono, Ralf Herwig, Trey Ideker, Atanas Kamburov. Evidence mining and novelty assessment of protein-protein interactions with the ConsensusPathDB plugin for Cytoscape |
| 2798 | -- | 2800 | C. Voegele, L. Alteyrac, E. Caboux, M. Smans, F. Lesueur, F. Le Calvez-Kelm, P. Hainaut. A sample storage management system for biobanks |
| 2801 | -- | 2802 | Miguel García-Remesal, Alejandro Cuevas, David Pérez-Rey, Luis Martín, Alberto Anguita, Diana de la Iglesia, Guillermo de la Calle, José Crespo, Victor Maojo. PubDNA Finder: a web database linking full-text articles to sequences of nucleic acids |