Journal: Bioinformatics

Volume 27, Issue 10

1345 -- 0Olli-P. Kallioniemi, Lodewyk Wessels, Alfonso Valencia. On the organization of bioinformatics core services in biology-based research institutes
1346 -- 1350Daniel C. Ellwanger, Florian A. Büttner, Hans-Werner Mewes, Volker Stümpflen. The sufficient minimal set of miRNA seed types
1351 -- 1358Jochen Blom, Tobias Jakobi, Daniel Doppmeier, Sebastian Jaenicke, Jörn Kalinowski, Jens Stoye, Alexander Goesmann. Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming
1359 -- 1367W. Timothy J. White, Barbara R. Holland. Faster exact maximum parsimony search with XMP
1368 -- 1376Ping Xuan, Maozu Guo, Xiaoyan Liu, Yangchao Huang, Wenbin Li, Yufei Huang. ::::PlantMiRNAPred::::: efficient classification of real and pseudo plant pre-miRNAs
1377 -- 1383Klaus Jung, Benjamin Becker, Edgar Brunner, Tim Beißbarth. Comparison of global tests for functional gene sets in two-group designs and selection of potentially effect-causing genes
1384 -- 1389Erdal Cosgun, Nita A. Limdi, Christine W. Duarte. High-dimensional pharmacogenetic prediction of a continuous trait using machine learning techniques with application to warfarin dose prediction in African Americans
1390 -- 1396Oleksii Kuchaiev, Natasa Przulj. Integrative network alignment reveals large regions of global network similarity in yeast and human
1397 -- 1403Georg Basler, Oliver Ebenhöh, Joachim Selbig, Zoran Nikoloski. Mass-balanced randomization of metabolic networks
1404 -- 1412Martial Sankar, Karen S. Osmont, Jakub Rolcik, Bojan Gujas, Danuse Tarkowska, Miroslav Strnad, Ioannis Xenarios, Christian S. Hardtke. A qualitative continuous model of cellular auxin and brassinosteroid signaling and their crosstalk
1413 -- 1421Christophe Bécavin, Nicolas Tchitchek, Colette Mintsa-Eya, Annick Lesne, Arndt Benecke. Improving the efficiency of multidimensional scaling in the analysis of high-dimensional data using singular value decomposition
1422 -- 1428Hei-Chia Wang, Yi-Hsiu Chen, Hung-Yu Kao, Shaw-Jenq Tsai. Inference of transcriptional regulatory network by bootstrapping patterns
1429 -- 1435Lauren Becnel Boyd, Scott P. Hunicke-Smith, Grace A. Stafford, Elaine T. Freund, Michele Ehlman, Uma Chandran, Robert Dennis, Anna T. Fernandez, Stephen Goldstein, David Steffen, Benjamin Tycko, Juli D. Klemm. The caBIG® Life Science Business Architecture Model
1436 -- 1437Yuanwei Zhang, Yifan Yang, Huan Zhang, Xiaohua Jiang, Bo Xu, Yu Xue, Yunxia Cao, Qian Zhai, Yong Zhai, Mingqing Xu, Howard J. Cooke, Qinghua Shi. Prediction of novel pre-microRNAs with high accuracy through boosting and SVM
1438 -- 1439Timothy Nugent, Sean Ward, David T. Jones. The MEMPACK alpha-helical transmembrane protein structure prediction server
1440 -- 1441Ola Larsson, Nahum Sonenberg, Robert Nadon. ::::anota::::: analysis of differential translation in genome-wide studies
1442 -- 1443Marc Johannes, Holger Fröhlich, Holger Sültmann, Tim Beißbarth. pathClass: an R-package for integration of pathway knowledge into support vector machines for biomarker discovery
1444 -- 1446Xinan Yang, Jianrong Li, Younghee Lee, Yves A. Lussier. ::::GO-Module::::: functional synthesis and improved interpretation of Gene Ontology patterns
1447 -- 1448Li Chen, George Wu, Hongkai Ji. hmChIP: a database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data