| 3331 | -- | 3332 | Lars Juhl Jensen, Alex Bateman. The rise and fall of supervised machine learning techniques |
| 3333 | -- | 3340 | Sonja Althammer, Juan González-Vallinas, Cecilia Ballaré, Miguel Beato, Eduardo Eyras. Pyicos: a versatile toolkit for the analysis of high-throughput sequencing data |
| 3341 | -- | 3347 | Tse-Yi Wang, Chien-Hao Su, Huai-Kuang Tsai. MetaRank: a rank conversion scheme for comparative analysis of microbial community compositions |
| 3348 | -- | 3355 | Scott Hazelhurst, Zsuzsanna Lipták. KABOOM! A new suffix array based algorithm for clustering expression data |
| 3356 | -- | 3363 | Xugang Ye, Guoli Wang, Stephen F. Altschul. An assessment of substitution scores for protein profile-profile comparison |
| 3364 | -- | 3370 | Mahmoud ElHefnawi, Nafisa Hassan, Mona Kamar, Rania Siam, Anna Lisa Remoli, Iman El-Azab, Osama AlAidy, Giulia Marsili, Marco Sgarbanti. The design of optimal therapeutic small interfering RNA molecules targeting diverse strains of influenza A virus |
| 3371 | -- | 3378 | Qian Cong, Lisa N. Kinch, Jimin Pei, Shuoyong Shi, Vyacheslav N. Grishin, Wenlin Li, Nick V. Grishin. An automatic method for CASP9 free modeling structure prediction assessment |
| 3379 | -- | 3384 | Yunqi Li, Yaping Fang, Jianwen Fang. Predicting residue-residue contacts using random forest models |
| 3385 | -- | 3391 | Carsten Kemena, Jean-François Taly, Jens Kleinjung, Cédric Notredame. STRIKE: evaluation of protein MSAs using a single 3D structure |
| 3392 | -- | 3398 | Robbie P. Joosten, Krista Joosten, Serge X. Cohen, Gert Vriend, Anastassis Perrakis. Automatic rebuilding and optimization of crystallographic structures in the Protein Data Bank |
| 3399 | -- | 3406 | Levi Waldron, Melania Pintilie, Ming-Sound Tsao, Frances A. Shepherd, Curtis Huttenhower, Igor Jurisica. Optimized application of penalized regression methods to diverse genomic data |
| 3407 | -- | 3414 | Mattia Zampieri, Giuseppe Legname, Daniel Segrè, Claudio Altafini. A system-level approach for deciphering the transcriptional response to prion infection |
| 3415 | -- | 3422 | Nicholas E. Newell. Cascade detection for the extraction of localized sequence features; specificity results for HIV-1 protease and structure-function results for the Schellman loop |
| 3423 | -- | 3424 | Ryan K. Dale, Brent S. Pedersen, Aaron R. Quinlan. Pybedtools: a flexible Python library for manipulating genomic datasets and annotations |
| 3425 | -- | 3426 | Oksana Riba-Grognuz, Laurent Keller, Laurent Falquet, Ioannis Xenarios, Yannick Wurm. de novo genome assemblies |
| 3427 | -- | 3429 | Marcelo Rivas-Astroza, Dan Xie, Xiaoyi Cao, Sheng Zhong. Mapping personal functional data to personal genomes |
| 3430 | -- | 3431 | Douglas M. Fowler, Carlos L. Araya, Wayne Gerard, Stanley Fields. Enrich: software for analysis of protein function by enrichment and depletion of variants |
| 3432 | -- | 3434 | Yang Zhou, Wubin Qu, Yiming Lu, Yanchun Zhang, Xiaolei Wang, Dongsheng Zhao, Yi Yang, Chenggang Zhang. VizPrimer: a web server for visualized PCR primer design based on known gene structure |
| 3435 | -- | 3436 | Robert Kofler, Ram Vinay Pandey, Christian Schlötterer. PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq) |
| 3437 | -- | 3438 | Huaiyu Mi, Anushya Muruganujan, Emek Demir, Yukiko Matsuoka, Akira Funahashi, Hiroaki Kitano, Paul D. Thomas. BioPAX support in CellDesigner |
| 3439 | -- | 3440 | Kamil Fijorek, Damian Fijorek, Barbara Wisniowska, Sebastian Polak. BDTcomparator: a program for comparing binary classifiers |