| 1241 | -- | 1249 | Chen Lu, Jeanne Latourelle, George T. O'Connor, Josée Dupuis, Eric D. Kolaczyk. Network-guided sparse regression modeling for detection of gene-by-gene interactions |
| 1250 | -- | 1259 | Ergude Bao, Tao Jiang, Thomas Girke. BRANCH: boosting RNA-Seq assemblies with partial or related genomic sequences |
| 1260 | -- | 1267 | Martin S. Lindner, Maximilian Kollock, Franziska Zickmann, Bernhard Y. Renard. Analyzing genome coverage profiles with applications to quality control in metagenomics |
| 1268 | -- | 1274 | Marco Pagni, Hélène Niculita-Hirzel, Loïc Pellissier, Anne Dubuis, Ioannis Xenarios, Antoine Guisan, Ian R. Sanders, Jérôme Goudet, Nicolas Guex. Density-based hierarchical clustering of pyro-sequences on a large scale - the case of fungal ITS1 |
| 1275 | -- | 1282 | Danni Yu, Wolfgang Huber, Olga Vitek. Shrinkage estimation of dispersion in Negative Binomial models for RNA-seq experiments with small sample size |
| 1283 | -- | 1291 | Tarmo Äijö, Kirsi Granberg, Harri Lähdesmäki. Sorad: a systems biology approach to predict and modulate dynamic signaling pathway response from phosphoproteome time-course measurements |
| 1292 | -- | 1298 | Bjørn Olav Hald, Morten Garkier Hendriksen, Preben Graae Sørensen. Programming strategy for efficient modeling of dynamics in a population of heterogeneous cells |
| 1299 | -- | 1307 | Ivan Chang, Pierre Baldi. A unifying kinetic framework for modeling oxidoreductase-catalyzed reactions |
| 1308 | -- | 1316 | Lieven P. C. Verbeke, Lore Cloots, Piet Demeester, Jan Fostier, Kathleen Marchal. EPSILON: an eQTL prioritization framework using similarity measures derived from local networks |
| 1317 | -- | 1324 | Yong-Cui Wang, Shi-Long Chen, Nai-Yang Deng, Yong Wang. Network predicting drug's anatomical therapeutic chemical code |
| 1325 | -- | 1332 | Jon C. Ison, Matús Kalas, Inge Jonassen, Dan M. Bolser, Mahmut Uludag, Hamish McWilliam, James Malone, Rodrigo Lopez, Steve Pettifer, Peter M. Rice. EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats |
| 1333 | -- | 1340 | David E. Robbins, Alexander Grüneberg, Helena F. Deus, Murat M. Tanik, Jonas S. Almeida. A self-updating road map of The Cancer Genome Atlas |
| 1341 | -- | 1342 | Glenn Hickey, Benedict Paten, Dent Earl, Daniel Zerbino, David Haussler. HAL: a hierarchical format for storing and analyzing multiple genome alignments |
| 1343 | -- | 1344 | Diogo Borges, Yasset Pérez-Riverol, Fabio C. S. Nogueira, Gilberto B. Domont, Jesus Noda, Felipe da Veiga Leprevost, Vladimir Besada, Felipe M. G. França, Valmir C. Barbosa, Aniel Sánchez, Paulo C. Carvalho. Effectively addressing complex proteomic search spaces with peptide spectrum matching |
| 1345 | -- | 1347 | Gerald Weber. TfReg: calculating DNA and RNA melting temperatures and opening profiles with mesoscopic models |
| 1348 | -- | 1349 | Vincent Navratil, Clément Pontoizeau, Elise Billoir, Benjamin J. Blaise. SRV: an open-source toolbox to accelerate the recovery of metabolic biomarkers and correlations from metabolic phenotyping datasets |
| 1350 | -- | 1351 | Samad Lotia, Jason Montojo, Yue Dong, Gary D. Bader, Alexander R. Pico. Cytoscape App Store |
| 1352 | -- | 1354 | Hanfei Sun, Bo Qin, Tao Liu, Qixuan Wang, Jing Liu, Juan Wang, Xueqiu Lin, Yulin Yang, Len Taing, Prakash K. Rao, Myles Brown, Yong Zhang, Henry Long, X. Shirley Liu. CistromeFinder for ChIP-seq and DNase-seq data reuse |
| 1355 | -- | 1356 | Amit Zeisel, Assif Yitzhaky, Noa Bossel Ben-Moshe, Eytan Domany. An accessible database for mouse and human whole transcriptome qPCR primers |
| 1357 | -- | 1358 | Saliha Durmus Tekir, Tunahan Çakir, Emre Ardiç, Ali Semih Sayilirbas, Gökhan Konuk, Mithat Konuk, Hasret Sariyer, Azat Ugurlu, Ilknur Karadeniz, Arzucan Özgür, Fatih Erdogan Sevilgen, Kutlu Ö. Ülgen. PHISTO: pathogen-host interaction search tool |
| 1359 | -- | 1360 | Richard J. Giuly, Keun-Young Kim, Mark H. Ellisman. DP2: Distributed 3D image segmentation using micro-labor workforce |