| 413 | -- | 419 | Alan Medlar, Dorota Glowacka, Horia Stanescu, Kevin Bryson, Robert Kleta. SwiftLink: parallel MCMC linkage analysis using multicore CPU and GPU |
| 420 | -- | 427 | Jia-Shing Chen, Wei-Shiang Hung, Hsiang-Han Chan, Shaw-Jenq Tsai, H. Sunny Sun. In silico identification of oncogenic potential of fyn-related kinase in hepatocellular carcinoma |
| 428 | -- | 434 | Nilgun Donmez, Michael Brudno. SCARPA: scaffolding reads with practical algorithms |
| 435 | -- | 443 | Scott C. Clark, Rob Egan, Peter I. Frazier, Zhong Wang. ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies |
| 444 | -- | 450 | Parameswaran Ramachandran, Gareth A. Palidwor, Christopher J. Porter, Theodore J. Perkins. MaSC: mappability-sensitive cross-correlation for estimating mean fragment length of single-end short-read sequencing data |
| 451 | -- | 460 | Mengjie Chen, Valentina Svicher, Anna Artese, Giosuè Costa, Claudia Alteri, Francesco Ortuso, Lucia Parrotta, Yang Liu, Chang Liu, Carlo-Federico Perno, Stefano Alcaro, Jing Zhang 0010. Detecting and understanding genetic and structural features in HIV-1 B subtype V3 underlying HIV-1 co-receptor usage |
| 461 | -- | 467 | Andrew McDavid, Greg Finak, Pratip K. Chattopadhyay, Maria Dominguez, Laurie Lamoreaux, Steven S. Ma, Mario Roederer, Raphael Gottardo. Data exploration, quality control and testing in single-cell qPCR-based gene expression experiments |
| 468 | -- | 475 | Rosario M. Piro, Ivan Molineris, Ferdinando Di Cunto, Roland Eils, Rainer König. Disease-gene discovery by integration of 3D gene expression and transcription factor binding affinities |
| 476 | -- | 482 | Jesse Gillis, Paul Pavlidis. Assessing identity, redundancy and confounds in Gene Ontology annotations over time |
| 483 | -- | 491 | Wayne Hayes, Kai Sun, Natasa Przulj. Graphlet-based measures are suitable for biological network comparison |
| 492 | -- | 493 | Jianrong Wang, Victoria V. Lunyak, I. King Jordan. BroadPeak: a novel algorithm for identifying broad peaks in diffuse ChIP-seq datasets |
| 494 | -- | 496 | Marcus R. Breese, Yunlong Liu. NGSUtils: a software suite for analyzing and manipulating next-generation sequencing datasets |
| 497 | -- | 498 | Jed Zaretzki, Charles Bergeron, Tao-Wei Huang, Patrik Rydberg, S. Joshua Swamidass, Curt M. Breneman. RS-WebPredictor: a server for predicting CYP-mediated sites of metabolism on drug-like molecules |
| 499 | -- | 503 | Timothy P. Levine, Rachel D. Daniels, Alberto T. Gatta, Louise H. Wong, Matthew J. Hayes. The product of C9orf72, a gene strongly implicated in neurodegeneration, is structurally related to DENN Rab-GEFs |
| 504 | -- | 505 | Castrense Savojardo, Piero Fariselli, Rita Casadio. BETAWARE: a machine-learning tool to detect and predict transmembrane beta-barrel proteins in prokaryotes |
| 506 | -- | 508 | Clemens Wrzodek, Johannes Eichner, Finja Büchel, Andreas Zell. InCroMAP: integrated analysis of cross-platform microarray and pathway data |
| 509 | -- | 510 | Daniel Bottomly, Beth Wilmot, Jeffrey W. Tyner, Christopher A. Eide, Marc M. Loriaux, Brian J. Druker, Shannon K. McWeeney. HitWalker: variant prioritization for personalized functional cancer genomics |
| 511 | -- | 512 | Linnea Järvstråt, Mikael Johansson, Urban Gullberg, Björn Nilsson. Ultranet: efficient solver for the sparse inverse covariance selection problem in gene network modeling |
| 513 | -- | 514 | Marco Antoniotti, Gary D. Bader, Giulio Caravagna, Silvia Crippa, Alex Graudenzi, Giancarlo Mauri. GeStoDifferent: a Cytoscape plugin for the generation and the identification of gene regulatory networks describing a stochastic cell differentiation process |
| 515 | -- | 517 | Woonghee Lee, Arash Bahrami, John L. Markley. ADAPT-NMR Enhancer: complete package for reduced dimensionality in protein NMR spectroscopy |
| 518 | -- | 519 | Arsen Arakelyan, Lilit Nersisyan. KEGGParser: parsing and editing KEGG pathway maps in Matlab |
| 520 | -- | 522 | Frank Kramer, Michaela Bayerlová, Florian Klemm, Annalen Bleckmann, Tim Beißbarth. rBiopaxParser - an R package to parse, modify and visualize BioPAX data |
| 523 | -- | 524 | Nikolas Fechner, George Papadatos, David Evans, John Richard Morphy, Suzanne Clare Brewerton, David Thorner, Michael Bodkin. ChEMBLSpace - a graphical explorer of the chemogenomic space covered by the ChEMBL database |
| 525 | -- | 527 | Eamonn Maguire, Alejandra González Beltrán, Patricia L. Whetzel, Susanna-Assunta Sansone, Philippe Rocca-Serra. OntoMaton: a Bioportal powered ontology widget for Google Spreadsheets |
| 528 | -- | 531 | Qing Duan, Eric Yi Liu, Damien C. Croteau-Chonka, Karen L. Mohlke, Yun Li. A comprehensive SNP and indel imputability database |