| 1343 | -- | 1352 | Clara Pizzuti, Simona E. Rombo. Algorithms and tools for protein-protein interaction networks clustering, with a special focus on population-based stochastic methods |
| 1353 | -- | 0 | Robert F. Murphy. A new era in bioimage informatics |
| 1354 | -- | 1362 | Yun Heo, Xiaolong Wu, Deming Chen, Jian Ma, Wen-mei W. Hwu. BLESS: Bloom filter-based error correction solution for high-throughput sequencing reads |
| 1363 | -- | 1369 | Martin J. Aryee, Andrew E. Jaffe, Héctor Corrada Bravo, Christine Ladd-Acosta, Andrew P. Feinberg, Kasper D. Hansen, Rafael A. Irizarry. Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays |
| 1370 | -- | 1376 | Priyadip Ray, Lingling Zheng, Joseph E. Lucas, Lawrence Carin. Bayesian joint analysis of heterogeneous genomics data |
| 1377 | -- | 1383 | Xiaowei Wang. Composition of seed sequence is a major determinant of microRNA targeting patterns |
| 1384 | -- | 1391 | Kaiyong Zhao, Xiaowen Chu. G-BLASTN: accelerating nucleotide alignment by graphics processors |
| 1392 | -- | 1399 | Marta Rosikiewicz, Marc Robinson-Rechavi. IQRray, a new method for Affymetrix microarray quality control, and the homologous organ conservation score, a new benchmark method for quality control metrics |
| 1400 | -- | 1408 | Iwona Pawlikowska, Gang Wu, Michael Edmonson, Zhifa Liu, Tanja Gruber, Jinghui Zhang, Stan Pounds. The most informative spacing test effectively discovers biologically relevant outliers or multiple modes in expression |
| 1409 | -- | 1416 | Bogdan Mirauta, Pierre Nicolas, Hugues Richard. Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models |
| 1417 | -- | 1423 | Martin Vincent, Katharina Perell, Finn Cilius Nielsen, Gedske Daugaard, Niels Richard Hansen. Modeling tissue contamination to improve molecular identification of the primary tumor site of metastases |
| 1424 | -- | 1430 | Klaus Jung, Hassan Dihazi, Asima Bibi, Gry H. Dihazi, Tim Beißbarth. Adaption of the global test idea to proteomics data with missing values |
| 1431 | -- | 1439 | E. Andres Houseman, John Molitor, Carmen J. Marsit. Reference-free cell mixture adjustments in analysis of DNA methylation data |
| 1440 | -- | 1448 | Andreas Raue, Johan Karlsson, Maria Pia Saccomani, Mats Jirstrand, Jens Timmer. Comparison of approaches for parameter identifiability analysis of biological systems |
| 1449 | -- | 1455 | Dana Silverbush, Roded Sharan. Network orientation via shortest paths |
| 1456 | -- | 1463 | Kaifang Pang, Ying-Wooi Wan, William T. Choi, Lawrence A. Donehower, Jingchun Sun, Dhruv Pant, Zhandong Liu. Combinatorial therapy discovery using mixed integer linear programming |
| 1464 | -- | 1466 | Paul Theodor Pyl, Julian Gehring, Bernd Fischer 0003, Wolfgang Huber. h5vc: scalable nucleotide tallies with HDF5 |
| 1467 | -- | 1468 | Alex Chun-Hong Fok, Sunny Siu-Nam Mok, Sau Dan Lee, Kevin Y. Yip. ECplot: an online tool for making standardized plots from large datasets for bioinformatics publications |
| 1469 | -- | 1470 | Andrey Tovchigrechko, Pratap Venepally, Samuel H. Payne. PGP: parallel prokaryotic proteogenomics pipeline for MPI clusters, high-throughput batch clusters and multicore workstations |
| 1471 | -- | 1472 | Fabian A. Buske, Hugh J. French, Martin A. Smith, Susan J. Clark, Denis C. Bauer. NGSANE: a lightweight production informatics framework for high-throughput data analysis |
| 1473 | -- | 1475 | Sangsu Bae, Jeongbin Park, Jin-Soo Kim. Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases |
| 1476 | -- | 1477 | Fernando Izquierdo-Carrasco, John Cazes, Stephen A. Smith, Alexandros Stamatakis. PUmPER: phylogenies updated perpetually |
| 1478 | -- | 1480 | Ramon Guixà-González, Ismael Rodriguez-Espigares, Juan Manuel Ramírez-Anguita, Pau Carrió-Gaspar, Hector Martinez-Seara, Toni Giorgino, Jana Selent. MEMBPLUGIN: studying membrane complexity in VMD |
| 1481 | -- | 1483 | Jamel Meslamani, Steven G. Smith, Roberto Sanchez, Ming-Ming Zhou. ChEpiMod: a knowledgebase for chemical modulators of epigenome reader domains |
| 1484 | -- | 1485 | Sander Bollen, Mathias Leddin, Miguel A. Andrade-Navarro, Nancy Mah. CAFE: an R package for the detection of gross chromosomal abnormalities from gene expression microarray data |
| 1486 | -- | 1487 | Matteo Fumagalli, Filipe G. Vieira, Tyler Linderoth, Rasmus Nielsen. ngsTools: methods for population genetics analyses from next-generation sequencing data |
| 1488 | -- | 1490 | James T. Monacell, Ignazio Carbone. Mobyle SNAP Workbench: a web-based analysis portal for population genetics and evolutionary genomics |
| 1491 | -- | 1492 | Michael Pedersen, Nicolas Oury, Colin Gravill, Andrew Phillips. Bio Simulators: a web UI for biological simulation |