| 2093 | -- | 2097 | Darius Kazlauskas, Ceslovas Venclovas. Herpesviral helicase-primase subunit UL8 is inactivated B-family polymerase |
| 2098 | -- | 2104 | Rong W. Zablocki, Andrew J. Schork, Richard A. Levine, Ole A. Andreassen, Anders M. Dale, Wesley K. Thompson. Covariate-modulated local false discovery rate for genome-wide association studies |
| 2105 | -- | 2113 | Hervé Marie-Nelly, Martial Marbouty, Axel Cournac, Gianni Liti, Gilles Fischer, Christophe Zimmer, Romain Koszul. Filling annotation gaps in yeast genomes using genome-wide contact maps |
| 2114 | -- | 2120 | Anthony M. Bolger, Marc Lohse, Björn Usadel. Trimmomatic: a flexible trimmer for Illumina sequence data |
| 2121 | -- | 2129 | Yi Li, Xiaohui Xie. Deconvolving tumor purity and ploidy by integrating copy number alterations and loss of heterozygosity |
| 2130 | -- | 2136 | Rodrigo Cánovas, Alistair Moffat, Andrew Turpin. Lossy compression of quality scores in genomic data |
| 2137 | -- | 2141 | Amir Toporik, Itamar Borukhov, Avihay Apatoff, Doron Gerber, Yossef Kliger. Computational identification of natural peptides based on analysis of molecular evolution |
| 2142 | -- | 2149 | Zeyneb Kurt, Nizamettin Aydin, Gökmen Altay. A comprehensive comparison of association estimators for gene network inference algorithms |
| 2150 | -- | 2154 | Michal Jamróz, Andrzej Kolinski, Sebastian Kmiecik. CABS-flex predictions of protein flexibility compared with NMR ensembles |
| 2155 | -- | 2161 | Alexandra Jauhiainen, Basetti Madhu, Masako Narita, Masashi Narita, John Griffiths, Simon Tavaré. Normalization of metabolomics data with applications to correlation maps |
| 2162 | -- | 2170 | Wei Wang, Zhi Wei, Hongzhe Li. A change-point model for identifying 3′UTR switching by next-generation RNA sequencing |
| 2171 | -- | 2178 | Han Zhang, William Wheeler, Zhaoming Wang, Philip R. Taylor, Kai Yu. A fast and powerful tree-based association test for detecting complex joint effects in case-control studies |
| 2179 | -- | 2188 | Andriy Derkach, Theodore Chiang, Jiafen Gong, Laura Addis, Sara Dobbins, Ian Tomlinson, Richard Houlston, Deb K. Pal, Lisa J. Strug. Association analysis using next-generation sequence data from publicly available control groups: the robust variance score statistic |
| 2189 | -- | 2196 | Alexandre Bureau, Samuel G. Younkin, Margaret M. Parker, Joan E. Bailey-Wilson, Mary L. Marazita, Jeffrey C. Murray, Elisabeth Mangold, Hasan Albacha-Hejazi, Terri H. Beaty, Ingo Ruczinski. Inferring rare disease risk variants based on exact probabilities of sharing by multiple affected relatives |
| 2197 | -- | 2203 | Jon Pey, Francisco J. Planes. Direct calculation of elementary flux modes satisfying several biological constraints in genome-scale metabolic networks |
| 2204 | -- | 2205 | Sylvain Mareschal, Sydney Dubois, Thierry Lecroq, Fabrice Jardin. Rgb: a scriptable genome browser for R |
| 2206 | -- | 2207 | Xin Zhou, Daofeng Li, Rebecca F. Lowdon, Joseph F. Costello, Ting Wang. methylC Track: visual integration of single-base resolution DNA methylation data on the WashU EpiGenome Browser |
| 2208 | -- | 2209 | Sung Kyu Robin Park, Aaron Aslanian, Daniel B. McClatchy, Xuemei Han, Harshil Shah, Meha Singh, Navin Rauniyar, James J. Moresco, Antonio F. M. Pinto, Jolene K. Diedrich, Claire Delahunty, John R. Yates III. Census 2: isobaric labeling data analysis |
| 2210 | -- | 2212 | Ju Xin Chin, Bevan Kai-Sheng Chung, Dong-Yup Lee. Codon Optimization OnLine (COOL): a web-based multi-objective optimization platform for synthetic gene design |
| 2213 | -- | 2215 | Lukasz Roguski, Sebastian Deorowicz. DSRC 2 - Industry-oriented compression of FASTQ files |
| 2216 | -- | 2218 | Matthew W. Pennell, Jonathan M. Eastman, Graham J. Slater, Joseph W. Brown, Josef C. Uyeda, Richard G. FitzJohn, Michael E. Alfaro, Luke J. Harmon. geiger v2.0: an expanded suite of methods for fitting macroevolutionary models to phylogenetic trees |
| 2219 | -- | 2220 | Sébastien Morin, Troels E. Linnet, Mathilde Lescanne, Paul Schanda, Gary S. Thompson, Martin Tollinger, Kaare Teilum, Stéphane Gagné, Dominique Marion, Christian Griesinger, Martin Blackledge, Edward J. d'Auvergne. relax: the analysis of biomolecular kinetics and thermodynamics using NMR relaxation dispersion data |
| 2221 | -- | 2223 | Björn Wallner. ProQM-resample: improved model quality assessment for membrane proteins by limited conformational sampling |
| 2224 | -- | 2226 | Wandaliz Torres-García, SiYuan Zheng, Andrey Sivachenko, Rahulsimham Vegesna, Qianghu Wang, Rong Yao, Michael F. Berger, John N. Weinstein, Gad Getz, Roel G. W. Verhaak. PRADA: pipeline for RNA sequencing data analysis |
| 2227 | -- | 2229 | Raeece Naeem, Lailatul Hidayah, Mark D. Preston, Taane G. Clark, Arnab Pain. SVAMP: sequence variation analysis, maps and phylogeny |
| 2230 | -- | 2232 | Alvin Leung, Gary D. Bader, Jüri Reimand. HyperModules: identifying clinically and phenotypically significant network modules with disease mutations for biomarker discovery |
| 2233 | -- | 2234 | Frédéric Fournier, Charles Joly Beauparlant, René Paradis, Arnaud Droit. rTANDEM, an R/Bioconductor package for MS/MS protein identification |
| 2235 | -- | 2236 | Horacio Caniza, Alfonso E. Romero, Samuel Heron, Haixuan Yang, Alessandra Devoto, Marco Frasca, Marco Mesiti, Giorgio Valentini, Alberto Paccanaro. GOssTo: a stand-alone application and a web tool for calculating semantic similarities on the Gene Ontology |
| 2237 | -- | 2238 | Dongfang Wang, Jin Gu, Ting Wang, Zijian Ding. OncomiRDB: a database for the experimentally verified oncogenic and tumor-suppressive microRNAs |
| 2239 | -- | 2241 | William Duren, Terry E. Weymouth, Tim Hull, Gilbert S. Omenn, Brian D. Athey, Charles F. Burant, Alla Karnovsky. MetDisease - connecting metabolites to diseases via literature |
| 2242 | -- | 0 | Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins, Li Chen, Yue Wang, Robert Clarke. Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic |