Journal: Bioinformatics

Volume 32, Issue 19

2891 -- 2895Zijian Ding, Songpeng Zu, Jin Gu. Evaluating the molecule-based prediction of clinical drug responses in cancer
2896 -- 2902Pol Cuscó, Guillaume J. Filion. Zerone: a ChIP-seq discretizer for multiple replicates with built-in quality control
2903 -- 2910Micol Marchetti-Bowick, Junming Yin, Judie A. Howrylak, Eric P. Xing. A time-varying group sparse additive model for genome-wide association studies of dynamic complex traits
2911 -- 2919Yuta Suzuki, Jonas Korlach, Stephen W. Turner, Tatsuya Tsukahara, Junko Taniguchi, Wei Qu, Kazuki Ichikawa, Jun Yoshimura, Hideaki Yurino, Yuji Takahashi, Jun Mitsui, Hiroyuki Ishiura, Shoji Tsuji, Hiroyuki Takeda, Shinichi Morishita. AgIn: measuring the landscape of CpG methylation of individual repetitive elements
2920 -- 2927Panu Somervuo, Sonja Koskela, Juho Pennanen, R. Henrik Nilsson, Otso Ovaskainen. Unbiased probabilistic taxonomic classification for DNA barcoding
2928 -- 2935Markus Fricke, Manja Marz. Prediction of conserved long-range RNA-RNA interactions in full viral genomes
2936 -- 2946Lijun Quan, Qiang Lv, Yang Zhang. STRUM: structure-based prediction of protein stability changes upon single-point mutation
2947 -- 2955Nouf S. Al-Numair, Luis Lopes, Petros Syrris, Lorenzo Monserrat, Perry Elliott, Andrew C. R. Martin. The structural effects of mutations can aid in differential phenotype prediction of beta-myosin heavy chain (Myosin-7) missense variants
2956 -- 2964Jing Yang, Christopher A. Penfold, Murray R. Grant, Magnus Rattray. Inferring the perturbation time from biological time course data
2965 -- 2972Yuanhua Huang, Guido Sanguinetti. Statistical modeling of isoform splicing dynamics from RNA-seq time series data
2973 -- 2980John E. Reid, Lorenz Wernisch. Pseudotime estimation: deconfounding single cell time series
2981 -- 2987Kun Ming Kenneth Lim, Chenhao Li, Kern Rei Chng, Niranjan Nagarajan. @MInter: automated text-mining of microbial interactions
2988 -- 2995Fábio Fabris, Alex Alves Freitas. New KEGG pathway-based interpretable features for classifying ageing-related mouse proteins
2996 -- 3004Guangyuan Fu, Jun Wang, Bo Yang, Guo-Xian Yu. NegGOA: negative GO annotations selection using ontology structure
3005 -- 3011Christopher B. Barnett, Kiyoko F. Aoki-Kinoshita, Kevin J. Naidoo. The Glycome Analytics Platform: an integrative framework for glycobioinformatics
3012 -- 3014Zachary L. Skidmore, Alex H. Wagner, Robert Lesurf, Katie M. Campbell, Jason Kunisaki, Obi L. Griffith, Malachi Griffith. GenVisR: Genomic Visualizations in R
3015 -- 3017F. Anthony San Lucas, Smruthy Sivakumar, Selina Vattathil, Jerry Fowler, Eduardo VilarE. Vilar, Paul Scheet. hapLOHseq
3018 -- 3020Tomasz Stokowy, Mateusz Garbulowski, Torunn Fiskerstrand, Rita Holdhus, Kornel Labun, Pawel Sztromwasser, Christian Gilissen, Alexander Hoischen, Gunnar Houge, Kjell Petersen, Inge Jonassen, Vidar M. Steen. RareVariantVis: new tool for visualization of causative variants in rare monogenic disorders using whole genome sequencing data
3021 -- 3023Maria Nattestad, Michael C. Schatz. Assemblytics: a web analytics tool for the detection of variants from an assembly
3024 -- 3026Zhong Wang, André L. Martins, Charles G. Danko. RTFBSDB: an integrated framework for transcription factor binding site analysis
3027 -- 3028Astrid Cruaud, Mathieu Gautier, Jean-Pierre Rossi, Jean-Yves Rasplus, Jérôme Gouzy. RAD-seq data for interspecific phylogeny
3029 -- 3031Billy Heung Wing Chang, Weidong Tian. GSA-Lightning: ultra-fast permutation-based gene set analysis
3032 -- 3034Pier Francesco Palamara. ARGON: fast, whole-genome simulation of the discrete time Wright-fisher process
3035 -- 3037Russell Corbett-Detig, Matt Jones. SELAM: simulation of epistasis and local adaptation during admixture with mate choice
3038 -- 3040Daniel Edsgärd, Björn Reinius, Rickard Sandberg. scphaser: haplotype inference using single-cell RNA-seq data
3041 -- 3043Francisco Salavert, Luz Garcia-Alonso, Rubén Sánchez, Roberto Alonso, Marta Bleda, Ignacio Medina, Joaquín Dopazo. Web-based network analysis and visualization using CellMaps
3044 -- 3046Sun Kim, Lana Yeganova, W. John Wilbur. Meshable: searching PubMed abstracts by utilizing MeSH and MeSH-derived topical terms
3047 -- 3048Philip Ewels, Måns Magnusson, Sverker Lundin, Max Käller. MultiQC: summarize analysis results for multiple tools and samples in a single report
3049 -- 3050Vijay Barve, Javier Otegui. bdvis: visualizing biodiversity data in R
3051 -- 0Forest Agostinelli, Nicholas Ceglia, Babak Shahbaba, Paolo Sassone-Corsi, Pierre Baldi. What time is it? Deep learning approaches for circadian rhythms