481 | -- | 489 | Guido Capitani, Jose M. Duarte, Kumaran Baskaran, Spencer Bliven, Joseph C. Somody. Understanding the fabric of protein crystals: computational classification of biological interfaces and crystal contacts |
490 | -- | 496 | Haoyang Zeng, Tatsunori B. Hashimoto, Daniel D. Kang, David K. Gifford. GERV: a statistical method for generative evaluation of regulatory variants for transcription factor binding |
497 | -- | 504 | Uwe Baier, Timo Beller, Enno Ohlebusch. Graphical pan-genome analysis with compressed suffix trees and the Burrows-Wheeler transform |
505 | -- | 510 | M. Kroon, Eric-Wubbo Lameijer, N. Lakenberg, Jayne Y. Hehir-Kwa, D. T. Thung, P. Eline Slagboom, Joost N. Kok, Kai Ye. Detecting dispersed duplications in high-throughput sequencing data using a database-free approach |
511 | -- | 517 | Massimo Andreatta, Morten Nielsen. Gapped sequence alignment using artificial neural networks: application to the MHC class I system |
518 | -- | 522 | Sarah Bastkowski, Vincent Moulton, Andreas Spillner 0001, Taoyang Wu. The minimum evolution problem is hard: a link between tree inference and graph clustering problems |
523 | -- | 532 | Alex Lewin, Habib Saadi, James E. Peters, Aida Moreno-Moral, James C. Lee, Kenneth G. C. Smith, Enrico Petretto, Leonardo Bottolo, Sylvia Richardson. MT-HESS: an efficient Bayesian approach for simultaneous association detection in OMICS datasets, with application to eQTL mapping in multiple tissues |
533 | -- | 541 | Sheida Nabavi, Daniel Schmolze, Mayinuer Maitituoheti, Sadhika Malladi, Andrew H. Beck. EMDomics: a robust and powerful method for the identification of genes differentially expressed between heterogeneous classes |
542 | -- | 548 | Qiongshi Lu, Xinwei Yao, Yiming Hu, Hongyu Zhao. GenoWAP: GWAS signal prioritization through integrated analysis of genomic functional annotation |
549 | -- | 556 | Emile R. Chimusa, Mamana Mbiyavanga, Gaston K. Mazandu, Nicola J. Mulder. ancGWAS: a post genome-wide association study method for interaction, pathway and ancestry analysis in homogeneous and admixed populations |
557 | -- | 562 | Po-Ju Yao, Ren Hua Chung. SeqSIMLA2_exact: simulate multiple disease sites in large pedigrees with given disease status for diseases with low prevalence |
563 | -- | 570 | Martin Scharm, Olaf Wolkenhauer, Dagmar Waltemath. An algorithm to detect and communicate the differences in computational models describing biological systems |
571 | -- | 578 | Thorsten Will, Volkhard Helms. PPIXpress: construction of condition-specific protein interaction networks based on transcript expression |
579 | -- | 586 | Chen Wang, Gang Hu, Kui Wang, Michal Brylinski, Lei Xie, Lukasz A. Kurgan. PDID: database of molecular-level putative protein-drug interactions in the structural human proteome |
587 | -- | 589 | Nathan C. Sheffield, Christoph Bock. LOLA: enrichment analysis for genomic region sets and regulatory elements in R and Bioconductor |
590 | -- | 592 | Heng Li. BGT: efficient and flexible genotype query across many samples |
593 | -- | 595 | Kathleen Oros Klein, Stepan Grinek, Sasha Bernatsky, Luigi Bouchard, Antonio Ciampi, Ines Colmegna, Jean-Philippe Fortin, Long Gao, Marie-France Hivert, Marie Hudson, Michael S. Kobor, Aurélie Labbe, Julia L. MacIsaac, Michael J. Meaney, Alexander M. Morin, Kieran J. O'Donnell, Tomi Pastinen, Marinus H. Van Ijzendoorn, Gregory Voisin, Celia M. T. Greenwood. funtooNorm: an R package for normalization of DNA methylation data when there are multiple cell or tissue types |
596 | -- | 598 | Jeffrey Staples, Lynette Ekunwe, Ethan M. Lange, James G. Wilson, Deborah A. Nickerson, Jennifer E. Below. PRIMUS: improving pedigree reconstruction using mitochondrial and Y haplotypes |
599 | -- | 601 | Cyril Denby Wilkes, Olivier Arnaiz, Linda Sperling. Paramecium interspersed DNA elimination studies |
602 | -- | 604 | Mayya Sedova, Lukasz Jaroszewski, Adam Godzik. Protael: protein data visualization library for the web |
605 | -- | 607 | Yu-Wei Wu, Blake A. Simmons, Steven W. Singer. MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets |
608 | -- | 610 | François Chevenet, Jean-Philippe Doyon, Céline Scornavacca, Edwin Jacox, Emmanuelle Jousselin, Vincent Berry. SylvX: a viewer for phylogenetic tree reconciliations |
611 | -- | 613 | Hyojung Ryu, GyuTae Lim, Bong Hyun Sung, Jinhyuk Lee. NMRe: a web server for NMR protein structure refinement with high-quality structure validation scores |
614 | -- | 615 | Lin Wang, Min Zhang, Emil Alexov. a of proteins, RNAs and DNAs |
616 | -- | 618 | Alexey G. Kikhney, Alejandro Panjkovich, Anna V. Sokolova, Dmitri I. Svergun. DARA: a web server for rapid search of structural neighbours using solution small angle X-ray scattering data |
619 | -- | 620 | Hirofumi Suzuki, Takeshi Kawabata, Haruki Nakamura. Omokage search: shape similarity search service for biomolecular structures in both the PDB and EMDB |
621 | -- | 623 | Matthieu Chartier, Etienne Adriansen, Rafael Najmanovich. IsoMIF Finder: online detection of binding site molecular interaction field similarities |
624 | -- | 626 | Ming-Huei Chen, Qiong Yang. RVFam: an R package for rare variant association analysis with family data |
627 | -- | 628 | António Múrias dos Santos, Maria Pilar Cabezas, Ana Isabel Tavares, Raquel Xavier, Madalena Branco. tcsBU: a tool to extend TCS network layout and visualization |
629 | -- | 631 | Bruce E. Shapiro, Eric Mjolsness. Pycellerator: an arrow-based reaction-like modelling language for biological simulations |
632 | -- | 634 | Jan Winter, Marco Breinig, Florian Heigwer, Dirk Brügemann, Svenja Leible, Oliver Pelz, Tianzuo Zhan, Michael Boutros. caRpools: an R package for exploratory data analysis and documentation of pooled CRISPR/Cas9 screens |
635 | -- | 637 | Juan J. Diaz-Montana, Owen J. L. Rackham, Norberto Díaz-Díaz, Enrico Petretto. Web-based Gene Pathogenicity Analysis (WGPA): a web platform to interpret gene pathogenicity from personal genome data |
638 | -- | 640 | Caterina Barillari, Diana S. M. Ottoz, Juan Mariano Fuentes-Serna, Chandrasekhar Ramakrishnan, Bernd Rinn, Fabian Rudolf. openBIS ELN-LIMS: an open-source database for academic laboratories |