| 641 | -- | 649 | Feng Liu, Chao Ren, Hao Li, Pingkun Zhou, Xiaochen Bo, Wenjie Shu. De novo identification of replication-timing domains in the human genome by deep learning |
| 650 | -- | 656 | Zheng Xu, Guosheng Zhang, Fulai Jin, Mengjie Chen, Terrence S. Furey, Patrick F. Sullivan, Zhaohui S. Qin, Ming Hu, Yun Li. A hidden Markov random field-based Bayesian method for the detection of long-range chromosomal interactions in Hi-C data |
| 657 | -- | 663 | Tomasz Konopka, Sebastian M. B. Nijman. Comparison of genetic variants in matched samples using thesaurus annotation |
| 664 | -- | 672 | Wonyul Lee, Jeffrey S. Morris. Identification of differentially methylated loci using wavelet-based functional mixed models |
| 673 | -- | 681 | Lorena Pantano, Marc R. Friedländer, Geòrgia Escaramís, Esther Lizano, Joan Pallarès-Albanell, Isidre Ferrer, Xavier Estivill, Eulalia Martí. Specific small-RNA signatures in the amygdala at premotor and motor stages of Parkinson's disease revealed by deep sequencing analysis |
| 682 | -- | 689 | Ben Li, Zhaonan Sun, Qing He, Yu Zhu, Zhaohui S. Qin. Bayesian inference with historical data-based informative priors improves detection of differentially expressed genes |
| 690 | -- | 696 | Charlotte Siska, Russell Bowler, Katerina Kechris. The discordant method: a novel approach for differential correlation |
| 697 | -- | 704 | Valerio Cestarelli, Giulia Fiscon, Giovanni Felici, Paola Bertolazzi, Emanuel Weitschek. CAMUR: Knowledge extraction from RNA-seq cancer data through equivalent classification rules |
| 705 | -- | 712 | Qi Shen, Jiyuan Hu, Ning Jiang, Xiaohua Hu, Zewei Luo, Hong Zhang. contamDE: differential expression analysis of RNA-seq data for contaminated tumor samples |
| 713 | -- | 721 | Wei Hao, Minsun Song, John D. Storey. Probabilistic models of genetic variation in structured populations applied to global human studies |
| 722 | -- | 729 | Eduardo Palma, Lilian Salinas, Julio Aracena. Enumeration and extension of non-equivalent deterministic update schedules in Boolean networks |
| 730 | -- | 737 | Matthias P. Gerstl, Steffen Klamt, Christian Jungreuthmayer, Jürgen Zanghellini. Exact quantification of cellular robustness in genome-scale metabolic networks |
| 738 | -- | 746 | Marie Denis, Mahlet G. Tadesse. Evaluation of hierarchical models for integrative genomic analyses |
| 747 | -- | 754 | A. Mazouchi, J. N. Milstein. Fast Optimized Cluster Algorithm for Localizations (FOCAL): a spatial cluster analysis for super-resolved microscopy |
| 755 | -- | 763 | Hao-Chih Lee, Tao Liao, Yongjie Jessica Zhang, Ge Yang. Shape component analysis: structure-preserving dimension reduction on biological shape spaces |
| 764 | -- | 766 | Minh Duc Cao, Devika Ganesamoorthy, Matthew A. Cooper, Lachlan J. M. Coin. Realtime analysis and visualization of MinION sequencing data with npReader |
| 767 | -- | 769 | Katharina J. Hoff, Simone Lange, Alexandre Lomsadze, Mark Borodovsky, Mario Stanke. BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS |
| 770 | -- | 772 | André Kahles, Jonas Behr, Gunnar Rätsch. MMR: a tool for read multi-mapper resolution |
| 773 | -- | 775 | Carmen Maria Livi, Petr Klus, Riccardo Delli Ponti, Gian Gaetano Tartaglia. signature: identification of ribonucleoproteins and RNA-binding regions |
| 776 | -- | 778 | Sumit Mukherjee, Supratim Sengupta. Riboswitch Scanner: an efficient pHMM-based web-server to detect riboswitches in genomic sequences |
| 779 | -- | 781 | Sneha Mitra, Leelavati Narlikar. de novo promoter architectures from genome-wide transcription start sites |
| 782 | -- | 785 | Dietmar Rieder, Thomas Amort, Elisabeth Kugler, Alexandra Lusser, Zlatko Trajanoski. meRanTK: methylated RNA analysis ToolKit |
| 786 | -- | 788 | Brant C. Faircloth. PHYLUCE is a software package for the analysis of conserved genomic loci |
| 789 | -- | 791 | Sebastian Höhna, Michael R. May, Brian R. Moore. TESS: an R package for efficiently simulating phylogenetic trees and performing Bayesian inference of lineage diversification rates |
| 792 | -- | 794 | Florian Kaiser, Alexander Eisold, Sebastian Bittrich, Dirk Labudde. Fit3D: a web application for highly accurate screening of spatial residue patterns in protein structure data |
| 795 | -- | 797 | Matthias Steinrücken, Ethan M. Jewett, Yun S. Song. SpectralTDF: transition densities of diffusion processes with time-varying selection parameters, mutation rates and effective population sizes |
| 798 | -- | 800 | Brandon R. Thomas, Lily A. Chylek, Joshua Colvin, Suman Sirimulla, Andrew H. A. Clayton, William S. Hlavacek, Richard G. Posner. BioNetFit: a fitting tool compatible with BioNetGen, NFsim and distributed computing environments |