| 1431 | -- | 1436 | Haihua Liu, Xiaoxiao Shang, Hao Zhu. LncRNA/DNA binding analysis reveals losses and gains and lineage specificity of genomic imprinting in mammals |
| 1437 | -- | 1446 | William H. Majoros, Michael Campbell, Carson Holt, Erin K. DeNardo, Doreen Ware, Andrew S. Allen, Mark Yandell, Timothy E. Reddy. High-throughput interpretation of gene structure changes in human and nonhuman resequencing data, using ACE |
| 1447 | -- | 1456 | Feng Zeng, ZiCheng Wang, Ying Wang, Jizhong Zhou, Ting Chen. Large-scale 16S gene assembly using metagenomics shotgun sequences |
| 1457 | -- | 1463 | Li-na Wang, Shao-Ping Shi, Hao-Dong Xu, Ping-Ping Wen, Jian-Ding Qiu. Computational prediction of species-specific malonylation sites via enhanced characteristic strategy |
| 1464 | -- | 1472 | Tom Paridaens, Glenn Van Wallendael, Wesley De Neve, Peter Lambert. AFRESh: an adaptive framework for compression of reads and assembled sequences with random access functionality |
| 1473 | -- | 1478 | Anthony Westbrook, Jordan Ramsdell, Taruna Schuelke, Louisa Normington, R. Daniel Bergeron, W. Kelley Thomas, Matthew D. MacManes. PALADIN: protein alignment for functional profiling whole metagenome shotgun data |
| 1479 | -- | 1487 | Qingzhen Hou, Paul F. G. De Geest, Wim F. Vranken, Jaap Heringa, K. Anton Feenstra. Seeing the trees through the forest: sequence-based homo- and heteromeric protein-protein interaction sites prediction using random forest |
| 1488 | -- | 1496 | Anjali Soni, Pooja Khurana, Tanya Singh, Bhyravabhotla Jayaram. A DNA intercalation methodology for an efficient prediction of ligand binding pose and energetics |
| 1497 | -- | 1504 | Pawel P. Wozniak, Gert Vriend, Malgorzata Kotulska. Correlated mutations select misfolded from properly folded proteins |
| 1505 | -- | 1513 | Malathi S. I. Dona, Luke A. Prendergast, Suresh Mathivanan, Shivakumar Keerthikumar, Agus Salim. Powerful differential expression analysis incorporating network topology for next-generation sequencing data |
| 1514 | -- | 1520 | Bradley C. Naylor, Michael T. Porter, Elise Wilson, Adam Herring, Spencer Lofthouse, Austin Hannemann, Stephen R. Piccolo, Alan L. Rockwood, John C. Price. DeuteRater: a tool for quantifying peptide isotope precision and kinetic proteomics |
| 1521 | -- | 1527 | Niki L. Dimou, Konstantinos D. Tsirigos, Arne Elofsson, Pantelis G. Bagos. GWAR: robust analysis and meta-analysis of genome-wide association studies |
| 1528 | -- | 1535 | Xiao-Tai Huang, Yuan Zhu, Leanne Lai Hang Chan, Zhongying Zhao, Hong Yan. Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification |
| 1536 | -- | 1544 | Yuanlong Liu, Myriam Brossard, Damian Roqueiro, Patricia Margaritte-Jeannin, Chloé Sarnowski, Emmanuelle Bouzigon, Florence Demenais. SigMod: an exact and efficient method to identify a strongly interconnected disease-associated module in a gene network |
| 1545 | -- | 1553 | Sumanta Basu, William Duren, Charles R. Evans, Charles F. Burant, George Michailidis, Alla Karnovsky. Sparse network modeling and metscape-based visualization methods for the analysis of large-scale metabolomics data |
| 1554 | -- | 1560 | Bharat Panwar, Gilbert S. Omenn, Yuanfang Guan. miRmine: a database of human miRNA expression profiles |
| 1561 | -- | 1562 | Mariusz Butkiewicz, Jonathan L. Haines, William S. Bush. Introducing COCOS: codon consequence scanner for annotating reading frame changes induced by stop-lost and frame shift variants |
| 1563 | -- | 1564 | Anthony O. Olarerin-George, Samie R. Jaffrey. MetaPlotR: a Perl/R pipeline for plotting metagenes of nucleotide modifications and other transcriptomic sites |
| 1565 | -- | 1567 | Maximilian Hastreiter, Tim Jeske, Jonathan Hoser, Michael Kluge, Kaarin Ahomaa, Marie-Sophie Friedl, Sebastian J. Kopetzky, Jan-Dominik Quell, H.-Werner Mewes, Robert Küffner. KNIME4NGS: a comprehensive toolbox for next generation sequencing analysis |
| 1568 | -- | 1569 | Dario Beraldi. ASCIIGenome: a command line genome browser for console terminals |
| 1570 | -- | 1571 | Xing Tang, Arunima Srivastava, Huayang Liu, Raghu Machiraju, Kun Huang, Gustavo Leone. annoPeak: a web application to annotate and visualize peaks from ChIP-seq/ChIP-exo-seq |
| 1572 | -- | 1574 | Putri W. Novianti, Barbara C. Snoek, Saskia M. Wilting, Mark A. van de Wiel. Better diagnostic signatures from RNAseq data through use of auxiliary co-data |
| 1575 | -- | 1577 | Umberto Ferraro Petrillo, Gianluca Roscigno, Giuseppe Cattaneo, Raffaele Giancarlo. FASTdoop: a versatile and efficient library for the input of FASTA and FASTQ files for MapReduce Hadoop bioinformatics applications |
| 1578 | -- | 1580 | Karolis Uziela, David Menéndez Hurtado, Nanjiang Shu, Björn Wallner, Arne Elofsson. ProQ3D: improved model quality assessments using deep learning |
| 1581 | -- | 1582 | Daniel E. Cook, Erik C. Andersen. VCF-kit: assorted utilities for the variant call format |
| 1583 | -- | 1585 | Jing Guo, Feng Lin, Xiaomeng Zhang, Vivek Tanavde, Jie Zheng. NetLand: quantitative modeling and visualization of Waddington's epigenetic landscape using probabilistic potential |
| 1586 | -- | 1588 | P. Derouault, B. Parfait, R. Moulinas, C.-C. Barrot, F. Sturtz, S. Merillou, A.-S. Lia. 'COV'COP' allows to detect CNVs responsible for inherited diseases among amplicons sequencing data |
| 1589 | -- | 1590 | Martin Peters, Johann J. Eicher, David D. van Niekerk, Dagmar Waltemath, Jacky L. Snoep. The JWS online simulation database |