| 3691 | -- | 3695 | Pedro Carmona-Saez, Nieves Varela, María José Luque, Daniel Toro-Domínguez, Jordi Martorell-Marugan, Marta E. Alarcón-Riquelme, Concepción Marañón. Metagene projection characterizes GEN2.2 and CAL-1 as relevant human plasmacytoid dendritic cell models |
| 3696 | -- | 3700 | Trisevgeni Rapakoulia, Xin Gao, Yi Huang, Michiel J. L. de Hoon, Mariko Okada-Hatakeyama, Harukazu Suzuki, Erik Arner. Genome-scale regression analysis reveals a linear relationship for promoters and enhancers after combinatorial drug treatment |
| 3701 | -- | 3708 | Linghao Shen, Jun Zhu, Shuo-Yen Robert Li, Xiaodan Fan. Detect differentially methylated regions using non-homogeneous hidden Markov model for methylation array data |
| 3709 | -- | 3715 | Cuiping Pan, Gregory McInnes, Nicole Deflaux, Michael Snyder, Jonathan Bingham, Somalee Datta, Philip S. Tsao. Cloud-based interactive analytics for terabytes of genomic variants data |
| 3716 | -- | 3725 | Meng Wang, Zhanglong Ji, Shuang Wang, Jihoon Kim, Hai Yang, Xiaoqian Jiang, Lucila Ohno-Machado. Mechanisms to protect the privacy of families when using the transmission disequilibrium test in genome-wide association studies |
| 3726 | -- | 3732 | Pasi Rastas. Lep-MAP3: robust linkage mapping even for low-coverage whole genome sequencing data |
| 3733 | -- | 3739 | Kai Wang. Conditional asymptotic inference for the kernel association test |
| 3740 | -- | 3748 | André Müller, Christian Hundt 0002, Andreas Hildebrandt 0001, Thomas Hankeln, Bertil Schmidt. MetaCache: context-aware classification of metagenomic reads using minhashing |
| 3749 | -- | 3757 | Jianwei Zhu, Haicang Zhang, Shuai Cheng Li, Chao Wang, Lupeng Kong, Shiwei Sun, Wei-Mou Zheng, Dongbo Bu. Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts |
| 3758 | -- | 3766 | Tushar Jain, Todd Boland, Asparouh Lilov, Irina Burnina, Michael Brown, Yingda Xu, Maximiliano Vásquez. Prediction of delayed retention of antibodies in hydrophobic interaction chromatography from sequence using machine learning |
| 3767 | -- | 3775 | Alexis Delabrière, Ulli M. Hohenester, Benoit Colsch, Christophe Junot, François Fenaille, Etienne A. Thévenot. proFIA: a data preprocessing workflow for flow injection analysis coupled to high-resolution mass spectrometry |
| 3776 | -- | 3783 | Zhenwen Dai, Mudassar Iqbal, Neil D. Lawrence, Magnus Rattray. Efficient inference for sparse latent variable models of transcriptional regulation |
| 3784 | -- | 3792 | Chrysoula Zerva, Riza Batista-Navarro, Philip Day, Sophia Ananiadou. Using uncertainty to link and rank evidence from biomedical literature for model curation |
| 3793 | -- | 3795 | Joshua S. Martin, Zheng Xu, Alex P. Reiner, Karen L. Mohlke, Patrick F. Sullivan, Bing Ren, Ming Hu, Yun Li. HUGIn: Hi-C Unifying Genomic Interrogator |
| 3796 | -- | 3798 | Luis Vielva, María de Toro, Val F. Lanza, Fernando de la Cruz. PLACNETw: a web-based tool for plasmid reconstruction from bacterial genomes |
| 3799 | -- | 3801 | Steven M. Foltz, Wen-Wei Liang, Mingchao Xie, Li Ding. MIRMMR: binary classification of microsatellite instability using methylation and mutations |
| 3802 | -- | 3804 | Karol Pal, Vojtech Bystrý, Tomas Reigl, Martin Demko, Adam Krejci, Tasoula Touloumenidou, Evangelia Stalika, Boris Tichy, Paolo Ghia, Kostas Stamatopoulos, Sarka Pospisilova, Jitka Malcikova, Nikos Darzentas. GLASS: assisted and standardized assessment of gene variations from Sanger sequence trace data |
| 3805 | -- | 3807 | Marco Enrico Piras, Luca Pireddu, Gianluigi Zanetti. wft4galaxy: a workflow testing tool for galaxy |
| 3808 | -- | 3810 | João F. Matias Rodrigues, Thomas S. B. Schmidt, Janko Tackmann, Christian von Mering. MAPseq: highly efficient k-mer search with confidence estimates, for rRNA sequence analysis |
| 3811 | -- | 3812 | Xuning Wang, Charles Tilford, Isaac Neuhaus, Gabe Mintier, Qi Guo, John N. Feder, Stefan Kirov. CRISPR-DAV: CRISPR NGS data analysis and visualization pipeline |
| 3813 | -- | 3815 | Ignacio Faustino, Siewert J. Marrink. cgHeliParm: analysis of dsDNA helical parameters for coarse-grained MARTINI molecular dynamics simulations |
| 3816 | -- | 3818 | Alexandre Borrel, Denis Fourches. RealityConvert: a tool for preparing 3D models of biochemical structures for augmented and virtual reality |
| 3819 | -- | 3821 | Aleksandra M. Gierut, Wanda Niemyska, Pawel Dabrowski-Tumanski, Piotr Sulkowski, Joanna I. Sulkowska. PyLasso: a PyMOL plugin to identify lassos |
| 3822 | -- | 3823 | Marcin Radom, Agnieszka Rybarczyk, Bartlomiej Szawulak, Hubert Andrzejewski, Piotr Chabelski, Adam Kozak, Piotr Formanowicz. Holmes: a graphical tool for development, simulation and analysis of Petri net based models of complex biological systems |
| 3824 | -- | 3826 | Zachary Berndsen, Charles Bowman, Haerin Jang, Andrew B. Ward. EMHP: an accurate automated hole masking algorithm for single-particle cryo-EM image processing |
| 3827 | -- | 3835 | Inuk Jung, Kyuri Jo, Hyejin Kang, Hongryul Ahn, Youngjae Yu, Sun Kim. TimesVector: a vectorized clustering approach to the analysis of time series transcriptome data from multiple phenotypes |
| 3836 | -- | 3843 | Keisuke Yanagisawa, Shunta Komine, Shogo D. Suzuki, Masahito Ohue, Takashi Ishida, Yutaka Akiyama. Spresso: an ultrafast compound pre-screening method based on compound decomposition |
| 3844 | -- | 3851 | Liang Zhao, Qingfeng Chen, Wencui Li, Peng Jiang, Limsoon Wong, Jinyan Li. MapReduce for accurate error correction of next-generation sequencing data |
| 3852 | -- | 3860 | Yinglei Lai, Fanni Zhang, Tapan K. Nayak, Reza Modarres, Norman H. Lee, Timothy A. McCaffrey. An efficient concordant integrative analysis of multiple large-scale two-sample expression data sets |
| 3861 | -- | 3870 | Yi Liu, Weiping Sun, Baozhen Shan, Kaizhong Zhang. DISC: DISulfide linkage Characterization from tandem mass spectra |