Pasi Rastas - researchr alias

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Viewing Publication 1 - 15 from 15

2020

Lep-Anchor: automated construction of linkage map anchored haploid genomesPasi Rastas. bioinformatics, 36(8):2359-2364, 2020. [doi]

2019

Kermit: linkage map guided long read assemblyRiku Walve, Pasi Rastas, Leena Salmela. almob, 14(1), 2019. [doi]

2018

Kermit: Guided Long Read Assembly using Coloured Overlap GraphsRiku Walve, Pasi Rastas, Leena Salmela. wabi 2018: [doi]

2017

Lep-MAP3: robust linkage mapping even for low-coverage whole genome sequencing dataPasi Rastas. bioinformatics, 33(23):3726-3732, 2017. [doi]

2013

Lep-MAP: fast and accurate linkage map construction for large SNP datasetsPasi Rastas, Lars Paulin, Ilkka Hanski, Rainer Lehtonen, Petri Auvinen. bioinformatics, 29(24):3128-3134, 2013. [doi]

2011

Finding Significant Matches of Position Weight Matrices in Linear TimeCinzia Pizzi, Pasi Rastas, Esko Ukkonen. tcbb, 8(1):69-79, 2011. [doi]

2009

MOODS: fast search for position weight matrix matches in DNA sequencesJanne Korhonen, Petri MartinmÃ¤ki, Cinzia Pizzi, Pasi Rastas, Esko Ukkonen. bioinformatics, 25(23):3181-3182, 2009. [doi]

A General Framework for Local Pairwise Alignment Statistics with GapsPasi Rastas. wabi 2009: 233-245 [doi]

Computational Techniques for Haplotype Inference and for Local Alignment SignificancePasi Rastas. PhD thesis, University of Helsinki, Finland, 2009. [doi]

2008

Fast Bayesian Haplotype Inference Via Context Tree WeightingPasi Rastas, Jussi Kollin, Mikko Koivisto. wabi 2008: 259-270 [doi]

2007

Fast Search Algorithms for Position Specific Scoring MatricesCinzia Pizzi, Pasi Rastas, Esko Ukkonen. bird 2007: 239-250 [doi]

Haplotype Inference Via Hierarchical Genotype ParsingPasi Rastas, Esko Ukkonen. wabi 2007: 85-97 [doi]

2005

A Hidden Markov Technique for Haplotype ReconstructionPasi Rastas, Mikko Koivisto, Heikki Mannila, Esko Ukkonen. wabi 2005: 140-151 [doi]

2004

Hidden Markov Modelling Techniques for Haplotype AnalysisMikko Koivisto, Teemu Kivioja, Heikki Mannila, Pasi Rastas, Esko Ukkonen. alt 2004: 37-52 [doi]

Recombination SystemsMikko Koivisto, Pasi Rastas, Esko Ukkonen. BIRTHDAY 2004: 159-169 [doi]

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