Journal: Bioinformatics

Volume 9, Issue 3

243 -- 251T. Karasawa, K. Tabuchi, M. Fumoto, T. Yasukawa. Development of simulation models for protein folding in a thermal annealing process - I: A simulation of BPTI folding by the pearl necklace model
253 -- 258N. N. Kozlov, E. I. Kugushev. Computer simulation of tRNA secondary structure folding
259 -- 265Kenji Satou, Emiko Furuichi, Kyoko Takiguchi, Toshihisa Takagi, Satoru Kuhara. A deductive database system PACADE for analyzing 3-D and secondary structures of protein
267 -- 273Masato Ishikawa, Tomoyuki Toya, Masaki Hoshida, Katsumi Nitta, A. Ogiwara, Minoru Kanehisa. Multiple sequence alignment by parallel simulated annealing
275 -- 283Jürgen Kleffe, E. Grau. The joint distribution of patterns in random sequences with application to the RC-measure for expressivity
285 -- 290V. V. Panjukov. Finding steady alignments: similarity and distance
291 -- 297A. Z. Maksyutov, E. S. Zagrebelnaya. ADEPT: a computer program for prediction of protein antigenic determinants
315 -- 324T. Rouxel, Antoine Danchin, Alain Hénaut. METALGEN.DB: metabolism linked to the genome of Escherichia coli, a graphics-oriented database
325 -- 330A. D. Athanasiadis, A. A. Hatzopoulos, G. Theophilidis. A data-acquisition system for the analysis of the isometric tension generated by an electrically stimulated skeletal muscle
331 -- 335D. N. Nedde, Matthew O. Ward. Visualizing relationships between nucleic acid sequences using correlation images
337 -- 342D. W. Collins. FISH: a guide to protein-coding DNA sequences in the GenBank database
343 -- 348Christophe Lefèvre, Joh-E Ikeda. The position end-set tree: a small automaton for word recognition in biological sequences
349 -- 354Christophe Lefèvre, Joh-E Ikeda. Pattern recognition in DNA sequences and its application to consensus foot-printing
355 -- 360J. Mrazek, J. Kypr. UNIREP: a microcomputer program to find unique and repetitive nucleotide sequences in genomes
361 -- 370Osamu Gotoh. Optimal alignment between groups of sequences and its application to multiple sequence alignment
371 -- 372Hedvig Hegyi, Sándor Pongor. Predicting potential domain homologies from FASTA search results
373 -- 374Scott R. Presnell, Bruce I. Cohen, Fred E. Cohen. MacMatch: a tool for pattern-based protein secondary structure prediction
375 -- 0Edward S. Chen, C. Asano, Daniel B. Davison. Parallel alignment of DNA sequences on the Connection Machine CM-2