Journal: Genomics, Proteomics & Bioinformatics

Volume 5, Issue 3-4

143 -- 151Jing-Fa Xiao, Jun Yu. A Scenario on the Stepwise Evolution of the Genetic Code
158 -- 165Andy B. Chen, Kazunori Hamamura, Guohua Wang, Weirong Xing, Subburaman Mohan, Hiroki Yokota, Yunlong Liu. Model-based Comparative Prediction of Transcription-Factor Binding Motifs in Anabolic Responses in Bone
166 -- 176Purnima Guda, Chittibabu Guda, Shankar Subramaniam. Reconstruction of Pathways Associated with Amino Acid Metabolism in Human Mitochondria
177 -- 186Mahmood A. Mahdavi, Yen-Han Lin. Prediction of Protein-Protein Interactions Using Protein Signature Profiling
187 -- 195Manja Marz, Axel Mosig, Bärbel M. R. Stadler, Peter F. Stadler. U7 snRNAs: A Computational Survey
196 -- 206Sunil Archak, Javaregowda Nagaraju. Computational Prediction of Rice (Oryza sativa) miRNA Targets
207 -- 215Liping Chen, Jianping Ye, Yan Liu, Jinghuan Wang, Weiting Su, Fengtang Yang, Wenhui Nie. Construction, Characterization, and Chromosomal Mapping of a Fosmid Library of the White-Cheeked Gibbon (Nomascus leucogenys)
216 -- 235Frankie B. Stentz, Abbas E. Kitabchi. Transcriptome and Proteome Expressions Involved in Insulin Resistance in Muscle and Activated T-Lymphocytes of Patients with Type 2 Diabetes
236 -- 241Nandita Bachhawat, Balvinder Singh. Mycobacterial PE_PGRS Proteins Contain Calcium-Binding Motifs with Parallel beta-roll Folds
242 -- 249Nina Zhou, Lipo Wang. A Modified T-test Feature Selection Method and Its Application on the HapMap Genotype Data
250 -- 252S. Muthukrishnan, Aarti Garg, G. P. S. Raghava. Oxypred: Prediction and Classification of Oxygen-Binding Proteins
253 -- 255Susan Costantini, Giovanni Colonna, Angelo M. Facchiano. FASMA: A Service to Format and Analyze Sequences in Multiple Alignments
256 -- 259Edward M. Smith, Jack Littrell, Michael Olivier. Automated SNP Genotype Clustering Algorithm to Improve Data Completeness in High-Throughput SNP Genotyping Datasets from Custom Arrays

Volume 5, Issue 2

77 -- 85William C. S. Cho. Proteomics Technologies and Challenges
86 -- 101Maarten Clements, Eugene P. van Someren, Theo A. Knijnenburg, Marcel J. T. Reinders. Integration of Known Transcription Factor Binding Site Information and Gene Expression Data to Advance from Co-Expression to Co-Regulation
102 -- 110Jinyu Wu, Fangqing Zhao, Jie Bai, Gang Deng, Song Qin, Qiyu Bao. Adaptive Evolution of cry Genes in Bacillus thuringiensis: Implications for Their Specificity Determination
111 -- 120Li Zhu, Xian-Kai Liu, Ge Zhao, Yi-Dan Zhi, Xin Bu, Tian-Yi Ying, Er-Ling Feng, Jie Wang, Xue-Min Zhang, Pei-Tang Huang, Heng-Liang Wang. Dynamic Proteome Changes of Shigella flexneri 2a During Transition from Exponential Growth to Stationary Phase
121 -- 130Guylaine Poisson, Cedric Chauve, Xin Chen, Anne Bergeron. FragAnchor: A Large-Scale Predictor of Glycosylphosphatidylinositol Anchors in Eukaryote Protein Sequences by Qualitative Scoring
131 -- 142Wei Wei, Xiao-Dan Yu. Comparative Analysis of Regulatory Motif Discovery Tools for Transcription Factor Binding Sites

Volume 5, Issue 1

1 -- 6Jun Yu. A Content-Centric Organization of the Genetic Code
7 -- 14Hao Fan, Jia-You Chu. A Brief Review of Short Tandem Repeat Mutation
15 -- 24Xingdong Feng, Shu-Guang Huang, Jian-Yong Shou, Birong Liao, Jonathan M. Yingling, Xiang Ye, Xi Lin, Lawrence M. Gelbert, Eric W. Su, Jude E. Onyia, Shuyu Li. Analysis of Pathway Activity in Primary Tumors and NCI60 Cell Lines Using Gene Expression Profiling Data
25 -- 34Liang Zhang, Lin Tao, Lin Ye, Ling He, Yuan-Zhong Zhu, Yue-Dong Zhu, Yan Zhou. Alternative Splicing and Expression Profile Analysis of Expressed Sequence Tags in Domestic Pig
35 -- 44S. P. Kumar, V. Dalai, N. K. Singh, T. R. Sharma. Comparative Analysis of the 100 kb Region Containing the Pi-k::h:: Locus Between indica and japonica Rice Lines
45 -- 52Guillaume Brysbaert, Sebastian Noth, Arndt Benecke. Generation of Synthetic Transcriptome Data with Defined Statistical Properties for the Development and Testing of New Analysis Methods
53 -- 58Satoshi Tamaki, Kazuharu Arakawa, Nobuaki Kono, Masaru Tomita. Restauro-G: A Rapid Genome Re-Annotation System for Comparative Genomics
59 -- 65Qiao-Fang Hou, Bin Yu, Sheng-Bin Li. Genetic Polymorphisms of Nine X-STR Loci in Four Population Groups from Inner Mongolia, China
66 -- 69Ya-Jun Deng, Jiang-Wei Yan, Xiao-Guang Yu, Yuan-Zhe Li, Hao-Fang Mu, Yan-Qing Huang, Xiao-Tie Shi, Wei-Min Sun. Genetic Analysis of 15 STR Loci in Chinese Han Population from West China
70 -- 76Trias Thireou, George M. Spyrou, Vassilis Atlamazoglou. A Survey of the Availability of Primary Bioinformatics Web Resources