| 0 | -- | 0 | Gregory Kucherov, Andrey A. Mironov, Mikhail A. Roytberg. An Overview of the Algorithmic Session of MCCMB 05 |
| 197 | -- | 216 | Anantharaman Kalyanaraman, Srinivas Aluru. Efficient Algorithms and Software for Detection of Full-length Ltr Retrotransposons |
| 217 | -- | 240 | Xutao Deng, Huimin Geng, Hesham H. Ali. Joint Learning of Gene Functions - a Bayesian Network Model Approach |
| 241 | -- | 258 | Tu Minh Phuong, Zhen Lin, Russ B. Altman. Choosing Snps Using Feature Selection |
| 259 | -- | 274 | Anya Tsalenko, Roded Sharan, Vessela Kristensen, Hege Edvardsen, Anne-Lise Børresen-Dale, Amir Ben-Dor, Zohar Yakhini. Analysis of Snp-expression Association Matrices |
| 275 | -- | 298 | Sun-Yuan Kung, Man-Wai Mak, Ilias Tagkopoulos. Symmetric and Asymmetric Multi-modality Biclustering Analysis for Microarray Data Matrix |
| 299 | -- | 316 | Tobias P. Mann, Richard Humbert, John A. Stamatoyannopoulos, William Stafford Noble. Automated Validation of Polymerase Chain Reaction Amplicon Melting Curves |
| 317 | -- | 334 | Zhong Chen, Ying Xu. Structure Prediction of Helical Transmembrane Proteins at Two Length Scales |
| 335 | -- | 356 | Tarek S. Najdi, Chin-Rang Yang, Bruce E. Shapiro, G. Wesley Hatfield, Eric Mjolsness. Application of a Generalized Mwc Model for the Mathematical Simulation of Metabolic Pathways Regulated by Allosteric Enzymes |
| 357 | -- | 372 | Anna Karyagina, Anna Ershova, Mikhail Titov, Ivan Olovnikov, Evgeniy Aksianov, Alexandra Ryazanova, Elena Kubareva, Sergei Spirin, Andrei Alexeevski. Analysis of Conserved Hydrophobic Cores in Proteins and Supramolecular Complexes |
| 373 | -- | 388 | Oxana V. Galzitskaya, Sergiy O. Garbuzynskiy, Michail Yu. Lobanov. Is It Possible to Predict Amyloidogenic Regions from Sequence Alone? |
| 389 | -- | 402 | Elena Svirshchevskaya, Ludmila Alekseeva, Alexei Marchenko, Sergei Benevolenskii, Valentina M. Berzhec, Alexei Nekrasov. Selection of Cryptic B-cell Epitopes Using Informational Analysis of Protein Sequenses |
| 403 | -- | 414 | Yvonne Y. Li, Steven J. M. Jones, Artem Cherkasov. Selective Targeting of Indel-inferred Differences in Spatial Structures of Homologous Proteins |
| 415 | -- | 424 | Oleg V. Koliasnikov, Miroslav O. Kiral, Vitaly G. Grigorenko, Alexey M. Egorov. Antibody Cdr H3 Modeling Rules: Extension for the Case of Absence of Arg H94 and Asp H101 |
| 425 | -- | 442 | Irina I. Abnizova, Alistair G. Rust, Mark Robinson, Rene te Boekhorst, Walter R. Gilks. Transcription Binding Site Prediction Using Markov Models |
| 443 | -- | 454 | Olga N. Ozoline, Alexander A. Deev. Predicting Antisense Rnas in the Genomes of ::::escherichia Coli:::: and ::::salmonella Typhimurium:::: Using Promoter-search Algorithm Platprom |
| 455 | -- | 468 | Anatoly A. Sorokin, Alexandr A. Osypov, Timur R. Dzhelyadin, Petr M. Beskaravainy, Svetlana G. Kamzolova. Electrostatic Properties of Promoter Recognized by ::::e. Coli:::: Rna Polymerase Esigma:::70::: |
| 469 | -- | 482 | Natalia Polouliakh, Tohru Natsume, Hajime Harada, Wataru Fujibuchi, Paul Horton. Comparative Genomic Analysis of Transcription Regulation Elements Involved in Human Map Kinase G-protein Coupling Pathway |
| 483 | -- | 502 | Björn Olsson, Barbara Gawronska, Björn Erlendsson. Deriving Pathway Maps from Automated Text Analysis Using a Grammar-based Approach |
| 503 | -- | 514 | Daisuke Tominaga, Paul Horton. Inference of Scale-free Networks from Gene Expression Time Series |
| 515 | -- | 522 | Dmitry Klimov, Mikhail Skoblov, Andrei Ryazantzev, Tatiana Tiazhelova, Ancha Baranova. ::::in Silico:::: Search for Natural Antisense Transcripts Reveals their Differential Expression in Human Tumors |
| 523 | -- | 536 | Yuriy L. Orlov, Rene te Boekhorst, Irina I. Abnizova. Statistical Measures of the Structure of Genomic Sequences: Entropy, Complexity, and Position Information |
| 537 | -- | 552 | Mireille Régnier, Mathias Vandenbogaert. Comparison of Statistical Significance Criteria |
| 553 | -- | 570 | Gregory Kucherov, Laurent Noé, Mikhail A. Roytberg. A Unifying Framework for Seed Sensitivity and its Application to Subset Seeds |
| 589 | -- | 596 | Ludmila V. Danilova, Dmitri D. Pervouchine, Alexander V. Favorov, Andrey A. Mironov. Rnakinetics: a Web Server that Models Secondary Structure Kinetics of an Elongating RNA |
| 597 | -- | 608 | Natalya S. Bogatyreva, Alexei V. Finkelstein, Oxana V. Galzitskaya. Trend of Amino Acid Composition of Proteins of Different Taxa |
| 609 | -- | 620 | Swetlana Nikolajewa, Maik Friedel, Andreas Beyer, Thomas Wilhelm. The New Classification Scheme of the Genetic Code, its Early Evolution, and Trna Usage |