External Links

    Journal: J. Integrative Bioinformatics

    Volume 20, Issue 4

    0 -- 0Katharina Wolff, Ronja Friedhoff, Friderieke Schwarzer, Boas Pucker. Data literacy in genome research
    0 -- 0Haoyu Chao, Shilong Zhang, Yueming Hu, Qingyang Ni, Saige Xin, Liang Zhao, Vladimir A. Ivanisenko, Yuriy L. Orlov, Ming Chen 0005. Integrating omics databases for enhanced crop breeding
    0 -- 0Andreas Ian Lackner, Jürgen Pollheimer, Paulina Latos, Martin Knöfler, Sandra Haider. Gene-network based analysis of human placental trophoblast subtypes identifies critical genes as potential targets of therapeutic drugs
    0 -- 0Marco Zurdo-Tabernero, Angel Canal-Alonso, Fernando de la Prieta, Sara Rodríguez 0001, Javier Prieto 0001, Juan Manuel Corchado. An overview of machine learning and deep learning techniques for predicting epileptic seizures
    0 -- 0. Frontmatter
    0 -- 0Lena Raupach, Cassandra Königs. PharmoCo: a graph-based visualization of pharmacogenomic plausibility check reports for clinical decision support systems
    0 -- 0Jing Chen, Zixiang Wang, Jia Huang. SAMNA: accurate alignment of multiple biological networks based on simulated annealing

    Volume 20, Issue 3

    0 -- 0Jaroslav Budis, Werner Krampl, Marcel Kucharík, Rastislav Hekel, Adrián Goga, Jozef Sitarcík, Michal Lichvár, David Smolak, Miroslav Böhmer, Andrej Baláz, Frantisek Duris, Juraj Gazdarica, Katarina Soltys, Ján Turna, Ján Radvánszky, Tomás Szemes. SnakeLines: integrated set of computational pipelines for sequencing reads
    0 -- 0John Anders, Peter F. Stadler. RNAcode_Web - Convenient identification of evolutionary conserved protein coding regions
    0 -- 0Evgeniya A. Antropova, Tamara M. Khlebodarova, Pavel S. Demenkov, Anastasiia R. Volianskaia, Artur S. Venzel, Nikita V. Ivanisenko, Alexandr D. Gavrilenko, Timofey V. Ivanisenko, Anna V. Adamovskaya, Polina M. Revva, Nikolay A. Kolchanov, Inna N. Lavrik, Vladimir A. Ivanisenko. Reconstruction of the regulatory hypermethylation network controlling hepatocellular carcinoma development during hepatitis C viral infection
    0 -- 0Yulia E. Uvarova, Pavel S. Demenkov, Irina N. Kuzmicheva, Artur S. Venzel, Elena L. Mischenko, Timofey V. Ivanisenko, Vadim M. Efimov, Svetlana V. Bannikova, Asya R. Vasilieva, Vladimir A. Ivanisenko, Sergey E. Peltek. Accurate noise-robust classification of Bacillus species from MALDI-TOF MS spectra using a denoising autoencoder
    0 -- 0Grigory A. Oborotov, Konstantin Koshechkin, Yuriy L. Orlov. Application of Artificial Intelligence or machine learning in risk sharing agreements for pharmacotherapy risk management
    0 -- 0Andrea Marino, Blerina Sinaimeri, Enrico Tronci, Tiziana Calamoneri. STARGATE-X: a Python package for statistical analysis on the REACTOME network
    0 -- 0Yuriy L. Orlov, Ming Chen 0005, Nikolay A. Kolchanov, Ralf Hofestädt. BGRS: bioinformatics of genome regulation and data integration
    0 -- 0. Frontmatter

    Volume 20, Issue 2

    0 -- 0André D. Sousa, Sara Rocha, Jorge Vieira, Miguel Reboiro-Jato, Hugo López-Fernández, Cristina P. Vieira. On the identification of potential novel therapeutic targets for spinocerebellar ataxia type 1 (SCA1) neurodegenerative disease using EvoPPI3
    0 -- 0Carlos A. C. Bastos, Vera Afreixo, João M. O. S. Rodrigues, Armando J. Pinho. Concentration of inverted repeats along human DNA
    0 -- 0Ahmad Muhaimin Ismail, Muhammad Akmal bin Remli, Yee Wen Choon, Nurul Athirah Nasarudin, Nor-Syahidatul N. Ismail, Mohd Arfian Ismail, Mohd Saberi Mohamad. Artificial Bee Colony algorithm in estimating kinetic parameters for yeast fermentation pathway
    0 -- 0Hamed Ghazikhani, Gregory Butler. Enhanced identification of membrane transport proteins: a hybrid approach combining ProtBERT-BFD and convolutional neural networks
    0 -- 0. Frontmatter
    0 -- 0Nicolò Casano, Silvano Junior Santini, Pierpaolo Vittorini, Gaia Sinatti, Paolo Carducci, Claudio Maria Mastroianni, Maria Rosa Ciardi, Patrizia Pasculli, Emiliano Petrucci, Franco Marinangeli, Clara Balsano. Application of machine learning approach in emergency department to support clinical decision making for SARS-CoV-2 infected patients
    0 -- 0Thomas Papastergiou, Jérôme Azé, Sandra Bringay, Maxime Louet, Pascal Poncelet, Miyanou Rosales-Hurtado, Yen Vo-Hoang, Patricia Licznar-Fajardo, Jean-Denis Docquier, Laurent Gavara. Discovering NDM-1 inhibitors using molecular substructure embeddings representations
    0 -- 0Sara Duarte-Pereira, Sérgio Matos, José Luís Oliveira, Raquel M. Silva. Study of NAD-interacting proteins highlights the extent of NAD regulatory roles in the cell and its potential as a therapeutic target

    Volume 20, Issue 1

    0 -- 0. Frontmatter
    0 -- 0Akihiko Konagaya, Gregory Gutmann, Yuhui Zhang. Co-creation environment with cloud virtual reality and real-time artificial intelligence toward the design of molecular robots
    0 -- 0James C. Schaff, Anuradha Lakshminarayana, Robert F. Murphy, Frank T. Bergmann, Akira Funahashi, Devin P. Sullivan, Lucian P. Smith. SBML level 3 package: spatial processes, version 1, release 1
    0 -- 0Matthias König 0003, Padraig Gleeson, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka, Sarah M. Keating, Chris J. Myers, David P. Nickerson, Björn Sommer 0001, Dagmar Waltemath, Falk Schreiber. Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022
    0 -- 0Lukas Buecherl, Thomas Mitchell, James Scott-Brown, Prashant Vaidyanathan, Gonzalo Vidal, Hasan Baig, Bryan Bartley, Jacob Beal, Matthew Crowther, Pedro Fontanarrosa, Thomas E. Gorochowski, Raik Grünberg, Vishwesh V. Kulkarni, James Alastair McLaughlin, Göksel Misirli, Ernst Oberortner, Anil Wipat, Chris J. Myers. Synthetic biology open language (SBOL) version 3.1.0
    0 -- 0Savas Takan, Jens Allmer. Community-wide collaboration is a must to reinstall trust in bioinformatics solutions and biomedical interpretation
    0 -- 0Bassam Abdo Al-Hameli, Abdulrahman Ahmad Al-Sewari, Shadi Saleh Basurra, Jagdev Bhogal, Mohammed A. H. Ali. Diabetes disease prediction system using HNB classifier based on discretization method
    0 -- 0Michael Clerx, Michael T. Cooling, Jonathan Cooper, Alan Garny, Keri R. Moyle, David P. Nickerson, Poul M. F. Nielsen, Hugh Sorby. CellML 2.0.1
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