0 | -- | 0 | Keisuke Fujii 0001, Takeshi Kawasaki, Yuki Inaba, Yoshinobu Kawahara. Prediction and classification in equation-free collective motion dynamics |
0 | -- | 0 | Denise Carvalho-Silva, Leyla J. Garcia, Sarah L. Morgan, Cath Brooksbank, Ian Dunham. Ten simple rules for delivering live distance training in bioinformatics across the globe using webinars |
0 | -- | 0 | Stefano Giaimo, Jordi Arranz, Arne Traulsen. Invasion and effective size of graph-structured populations |
0 | -- | 0 | Holger Mohr, Katharina Zwosta, Dimitrije Markovic, Sebastian Bitzer, Uta Wolfensteller, Hannes Ruge. Deterministic response strategies in a trial-and-error learning task |
0 | -- | 0 | Susann Vorberg, Stefan Seemayer, Johannes Söding. Synthetic protein alignments by CCMgen quantify noise in residue-residue contact prediction |
0 | -- | 0 | William T. Adler, Wei Ji Ma. Comparing Bayesian and non-Bayesian accounts of human confidence reports |
0 | -- | 0 | Lina Meinecke, Praveer P. Sharma, Huijing Du, Lei Zhang 0061, Qing Nie, Thomas Schilling. Modeling craniofacial development reveals spatiotemporal constraints on robust patterning of the mandibular arch |
0 | -- | 0 | Daniel Jimenez-Carretero, Vahid Abrishami, Laura Fernandez-de-Manuel, Irene Palacios, Antonio Quílez-Álvarez, Alberto Díez-Sánchez, Miguel A. del Pozo, María C. Montoya. Tox_(R)CNN: Deep learning-based nuclei profiling tool for drug toxicity screening |
0 | -- | 0 | Jun Li 0040, Wei Zhu, Jun Wang 0047, Wenfei Li, Sheng Gong, Jian Zhang 0024, Wei Wang 0159. RNA3DCNN: Local and global quality assessments of RNA 3D structures using 3D deep convolutional neural networks |
0 | -- | 0 | Francisco J. H. Heras, Mikko Vähäsöyrinki, Jeremy E. Niven. Modulation of voltage-dependent K+ conductances in photoreceptors trades off investment in contrast gain for bandwidth |
0 | -- | 0 | Joana C. Xavier, Kiran Raosaheb Patil, Isabel Rocha. Metabolic models and gene essentiality data reveal essential and conserved metabolism in prokaryotes |
0 | -- | 0 | Giovanni B. Brandani, Shoji Takada. Chromatin remodelers couple inchworm motion with twist-defect formation to slide nucleosomal DNA |
0 | -- | 0 | Yusuf Ozuysal, David B. Kastner, Stephen A. Baccus. Adaptive feature detection from differential processing in parallel retinal pathways |
0 | -- | 0 | Gaël Varoquaux, Yannick Schwartz, Russell A. Poldrack, Baptiste Gauthier, Danilo Bzdok, Jean-Baptiste Poline, Bertrand Thirion. Atlases of cognition with large-scale human brain mapping |
0 | -- | 0 | Letícia Stock, Juliana Hosoume, Leonardo Cirqueira, Werner Treptow. Binding of the general anesthetic sevoflurane to ion channels |
0 | -- | 0 | Marie Levakova, Lubomir Kostal, Christelle Monsempès, Vincent Jacob, Philippe Lucas. Moth olfactory receptor neurons adjust their encoding efficiency to temporal statistics of pheromone fluctuations |
0 | -- | 0 | Ryan R. Wick, Louise M. Judd, Kathryn E. Holt. Deepbinner: Demultiplexing barcoded Oxford Nanopore reads with deep convolutional neural networks |
0 | -- | 0 | Brandon M. Butler, I. Can Kazan, Avishek Kumar, S. Banu Ozkan. Coevolving residues inform protein dynamics profiles and disease susceptibility of nSNVs |
0 | -- | 0 | Bjoern Peters, Steven E. Brenner, Edwin Wang, Donna K. Slonim, Maricel G. Kann. Putting benchmarks in their rightful place: The heart of computational biology |
0 | -- | 0 | Christiane Ehrt, Tobias Brinkjost, Oliver Koch. A benchmark driven guide to binding site comparison: An exhaustive evaluation using tailor-made data sets (ProSPECCTs) |
0 | -- | 0 | Andrej Berg, Oleksandra Kukharenko, Martin Scheffner, Christine Peter. Towards a molecular basis of ubiquitin signaling: A dual-scale simulation study of ubiquitin dimers |
0 | -- | 0 | Anne-Florence Bitbol. Inferring interaction partners from protein sequences using mutual information |
0 | -- | 0 | Nils Klughammer, Johanna Bischof, Nikolas Schnellbächer, Andrea Callegari, Péter Lénárt, Ulrich S. Schwarz. Cytoplasmic flows in starfish oocytes are fully determined by cortical contractions |
0 | -- | 0 | Oliver M. Crook, Claire M. Mulvey, Paul D. W. Kirk, Kathryn S. Lilley, Laurent Gatto. A Bayesian mixture modelling approach for spatial proteomics |
0 | -- | 0 | Ruben Zamora, Sebastian Korff, Qi Mi, Derek Barclay, Lukas Schimunek, Riccardo Zucca, Xerxes D. Arsiwalla, Richard L. Simmons, Paul F. M. J. Verschure, Timothy R. Billiar, Yoram Vodovotz. A computational analysis of dynamic, multi-organ inflammatory crosstalk induced by endotoxin in mice |
0 | -- | 0 | Erik M. Volz, Igor Siveroni. Bayesian phylodynamic inference with complex models |
0 | -- | 0 | Hongyang Li, Xin-Qiu Yao, Barry J. Grant. Comparative structural dynamic analysis of GTPases |
0 | -- | 0 | Jaume Bonet, Sarah Wehrle, Karen Schriever, Che Yang, Anne Billet, Fabian Sesterhenn, Andreas Scheck, Freyr Sverrisson, Barbora Veselkova, Sabrina Vollers, Roxanne Lourman, Mélanie Villard, Stéphane Rosset, Thomas Krey, Bruno E. Correia. Rosetta FunFolDes - A general framework for the computational design of functional proteins |
0 | -- | 0 | Laura Anton-Sanchez, Felix Effenberger, Concha Bielza, Pedro Larrañaga, Hermann Cuntz. A regularity index for dendrites - local statistics of a neuron's input space |
0 | -- | 0 | Reshma Basak, Rishikesh Narayanan. Active dendrites regulate the spatiotemporal spread of signaling microdomains |
0 | -- | 0 | Jason E. Pina, Mark Bodner, Bard Ermentrout. Oscillations in working memory and neural binding: A mechanism for multiple memories and their interactions |
0 | -- | 0 | Joanne C. Van Slooten, Sara Jahfari, Tomas Knapen, Jan Theeuwes. How pupil responses track value-based decision-making during and after reinforcement learning |
0 | -- | 0 | Xiaodong Huang, Zhen Song, Zhilin Qu. Determinants of early afterdepolarization properties in ventricular myocyte models |
0 | -- | 0 | Haleh Ebadi, Michael Perry, Keith Short, Konstantin Klemm, Claude Desplan, Peter F. Stadler, Anita Mehta. Patterning the insect eye: From stochastic to deterministic mechanisms |
0 | -- | 0 | Yarden Golan, Raphael Alhadeff, Fabian Glaser, Assaf Ganoth, Arieh Warshel, Yehuda G. Assaraf. Demonstrating aspects of multiscale modeling by studying the permeation pathway of the human ZnT2 zinc transporter |
0 | -- | 0 | Michael Muthukrishna, Michael Doebeli, Maciej Chudek, Joseph Henrich. The Cultural Brain Hypothesis: How culture drives brain expansion, sociality, and life history |
0 | -- | 0 | Maurits J. J. Dijkstra, Punto Bawono, Sanne Abeln, K. Anton Feenstra, Wan J. Fokkink, Jaap Heringa. Motif-Aware PRALINE: Improving the alignment of motif regions |
0 | -- | 0 | Anton Arkhipov, Nathan W. Gouwens, Yazan N. Billeh, Sergey L. Gratiy, Ramakrishnan Iyer, Ziqiang Wei, Zihao Xu, Reza Abbasi-Asl, Jim Berg, Michael A. Buice, Nicholas Cain, Nuno daCosta, Saskia C. J. De Vries, Daniel Denman, Severine Durand, David Feng, Tim Jarsky, Jérôme Lecoq, Brian Lee, Lu Li, Stefan Mihalas, Gabriel Koch Ocker, Shawn R. Olsen, R. Clay Reid, Gilberto Soler-Llavina, Staci A. Sorensen, Quanxin Wang, Jack Waters, Massimo Scanziani, Christof Koch. Visual physiology of the layer 4 cortical circuit in silico |
0 | -- | 0 | Hillary Koch, Dmytro Starenki, Sara J. Cooper, Richard M. Myers, Qunhua Li. powerTCR: A model-based approach to comparative analysis of the clone size distribution of the T cell receptor repertoire |
0 | -- | 0 | Ryman Shoko, Justen Manasa, Mcebisi Maphosa, Joshua Mbanga, Reagan Mudziwapasi, Victoria Nembaware, Walter T. Sanyika, Tawanda Tinago, Zedias Chikwambi, Cephas Mawere, Alice Matimba, Grace Mugumbate, Jonathan Mufandaedza, Nicola J. Mulder, Hugh Patterton. Strategies and opportunities for promoting bioinformatics in Zimbabwe |
0 | -- | 0 | Sarah F. Beul, Alexandros Goulas, Claus C. Hilgetag. Comprehensive computational modelling of the development of mammalian cortical connectivity underlying an architectonic type principle |
0 | -- | 0 | James A. Henderson, Pulin Gong. Functional mechanisms underlie the emergence of a diverse range of plasticity phenomena |
0 | -- | 0 | . Correction: Assessment of ab initio models of protein complexes by molecular dynamics |
0 | -- | 0 | Weilong Zhao, Xinwei Sher. Systematically benchmarking peptide-MHC binding predictors: From synthetic to naturally processed epitopes |
0 | -- | 0 | Jerome Kelleher, Kevin R. Thornton, Jaime Ashander, Peter L. Ralph. Efficient pedigree recording for fast population genetics simulation |
0 | -- | 0 | Stefano Luccioli, David Angulo-Garcia, Rosa Cossart, Arnaud Malvache, Laura Módol, Vitor Hugo Sousa, Paolo Bonifazi, Alessandro Torcini. Modeling driver cells in developing neuronal networks |
0 | -- | 0 | Grant Hartung, Claudia Vesel, Ryan Morley, Ali Alaraj, John G. Sled, David Kleinfeld, Andreas A. Linninger. Simulations of blood as a suspension predicts a depth dependent hematocrit in the circulation throughout the cerebral cortex |
0 | -- | 0 | Marieke A. Frassl, David P. Hamilton, Blaize A. Denfeld, Elvira de Eyto, Stephanie E. Hampton, Philipp S. Keller, Sapna Sharma, Abigail S. L. Lewis, Gesa A. Weyhenmeyer, Catherine M. O'Reilly, Mary E. Lofton, Núria Catalán. Ten simple rules for collaboratively writing a multi-authored paper |
0 | -- | 0 | Wei Wang 0169, Shanzhuo Zhang, Haibo Ni, Clifford J. Garratt, Mark R. Boyett, Jules C. Hancox, Henggui Zhang. Mechanistic insight into spontaneous transition from cellular alternans to arrhythmia - A simulation study |