| 1 | -- | 0 | Carlos Martín-Vide, Miguel A. Vega-Rodríguez. Algorithms for Computational Biology: Fifth Edition |
| 2 | -- | 13 | Klairton Lima Brito, Andre Rodrigues Oliveira, Ulisses Dias, Zanoni Dias. Heuristics for the Reversal and Transposition Distance Problem |
| 14 | -- | 26 | Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh. Polynomial-Time Algorithms for Phylogenetic Inference Problems Involving Duplication and Reticulation |
| 27 | -- | 36 | Atsuko Miyawaki-Kuwakado, Soichiro Komori, Fumihide Shiraishi. A Promising Method for Calculating True Steady-State Metabolite Concentrations in Large-Scale Metabolic Reaction Network Models |
| 37 | -- | 46 | Ranjan Kumar Maji, Sunirmal Khatua, Zhumur Ghosh. A Supervised Ensemble Approach for Sensitive microRNA Target Prediction |
| 47 | -- | 55 | Mehmet Kocak, Khyobeni Mozhui. An Application of the Bayesian Periodicity Test to Identify Diurnal Rhythm Genes in the Brain |
| 56 | -- | 70 | Syed Sazzad Ahmed, Swarup Roy, Jugal Kalita. Assessing the Effectiveness of Causality Inference Methods for Gene Regulatory Networks |
| 71 | -- | 81 | Cheng-Hong Yang, Yu-Da Lin, Li-Yeh Chuang. Class Balanced Multifactor Dimensionality Reduction to Detect Gene-Gene Interactions |
| 82 | -- | 90 | Jing wei Tan, Siow-Wee Chang, Sameem Abdul Kareem, Hwa Jen Yap, Kien-Thai Yong. Deep Learning for Plant Species Classification Using Leaf Vein Morphometric |
| 91 | -- | 101 | Yangqin Feng, Lei Zhang 0005, Juan Mo. Deep Manifold Preserving Autoencoder for Classifying Breast Cancer Histopathological Images |
| 102 | -- | 109 | Mahnaz Habibi, Pegah Khosravi. Disruption of Protein Complexes from Weighted Complex Networks |
| 110 | -- | 123 | Yicheng He, Junfeng Liu, Xia Ning. Drug Selection via Joint Push and Learning to Rank |
| 124 | -- | 135 | Jiyun Zhou, Qin Lu 0001, Ruifeng Xu, Lin Gui 0003, Hongpeng Wang. EL_LSTM: Prediction of DNA-Binding Residue from Protein Sequence by Combining Long Short-Term Memory and Ensemble Learning |
| 136 | -- | 148 | Tony Pan, Rahul Nihalani, Srinivas Aluru. Fast de Bruijn Graph Compaction in Distributed Memory Environments |
| 149 | -- | 157 | Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska. GaMRed - Adaptive Filtering of High-Throughput Biological Data |
| 158 | -- | 164 | Joan Carles Pons, Céline Scornavacca, Gabriel Cardona. kk LGT Networks |
| 165 | -- | 176 | Jiulun Cai, Hongmin Cai, Jiazhou Chen, Xi Yang. Identifying "Many-to-Many" Relationships between Gene-Expression Data and Drug-Response Data via Sparse Binary Matching |
| 177 | -- | 188 | Xingyu Liao, Min Li 0007, Junwei Luo, You Zou, Fang-Xiang Wu, Yi Pan 0001, Feng Luo, Jianxin Wang. Improving de novo Assembly Based on Read Classification |
| 189 | -- | 197 | Tianyi Zhang, Minghui Wang, Jianing Xi, Ao Li. LPGNMF: Predicting Long Non-Coding RNA and Protein Interaction Using Graph Regularized Nonnegative Matrix Factorization |
| 198 | -- | 206 | Patricia Carvajal López, Fernando D. Von Borstel, Amada Torres, Gabriella Rustici, Joaquín Gutiérrez, Eduardo Romero Vivas. Microarray-Based Quality Assessment as a Supporting Criterion for de novo Transcriptome Assembly Selection |
| 207 | -- | 219 | Sudipta Acharya, Sriparna Saha 0001, Prasanna Pradhan. Multi-Factored Gene-Gene Proximity Measures Exploiting Biological Knowledge Extracted from Gene Ontology: Application in Gene Clustering |
| 220 | -- | 225 | Tao Li, Xiankai Zhang, Feng Luo, Fang-Xiang Wu, Jianxin Wang. MultiMotifMaker: A Multi-Thread Tool for Identifying DNA Methylation Motifs from Pacbio Reads |
| 226 | -- | 237 | Xiangtao Li, Shixiong Zhang, Ka Chun Wong. Nature-Inspired Multiobjective Epistasis Elucidation from Genome-Wide Association Studies |
| 238 | -- | 249 | Guoxian Yu, Keyao Wang, Guangyuan Fu, Maozu Guo, Jun Wang 0035. NMFGO: Gene Function Prediction via Nonnegative Matrix Factorization with Gene Ontology |
| 250 | -- | 263 | Ali Foroughi Pour, Lori A. Dalton. Optimal Bayesian Filtering for Biomarker Discovery: Performance and Robustness |
| 264 | -- | 277 | Sepideh Mazrouee, Wei Wang 0010. PolyCluster: Minimum Fragment Disagreement Clustering for Polyploid Phasing |
| 278 | -- | 291 | Saptarshi Pyne, Alok Ranjan Kumar, Ashish Anand. Rapid Reconstruction of Time-Varying Gene Regulatory Networks |
| 292 | -- | 301 | Ramón A. Delgado, Zhiyong Chen 0001, Richard H. Middleton. Stepwise Tikhonov Regularisation: Application to the Prediction of HIV-1 Drug Resistance |
| 302 | -- | 315 | Kieran Alden, Jason Cosgrove, Mark Coles, Jon Timmis. Using Emulation to Engineer and Understand Simulations of Biological Systems |
| 316 | -- | 320 | Dor Ganor, Ron Y. Pinter, Meirav Zehavi. A Note on GRegNetSim: A Tool for the Discrete Simulation and Analysis of Genetic Regulatory Networks |
| 321 | -- | 326 | Chu Pan, Jiawei Luo, Jiao Zhang 0003, Xin Li. BiModule: Biclique Modularity Strategy for Identifying Transcription Factor and microRNA Co-Regulatory Modules |
| 327 | -- | 333 | Ka Chun Wong, Shankai Yan, Qiuzhen Lin, Xiangtao Li, Chengbin Peng. Deleterious Non-Synonymous Single Nucleotide Polymorphism Predictions on Human Transcription Factors |
| 334 | -- | 338 | Arash Bayat, Nandan P. Deshpande, Marc R. Wilkins, Sri Parameswaran. Fast Short Read De-Novo Assembly Using Overlap-Layout-Consensus Approach |
| 339 | -- | 346 | Jianxiao Liu, Jianbing Yan, Zonglin Tian, Yingjie Xiao, Haijun Liu, Songlin Hao, Xiaolong Zhang, Chaoyang Wang, Jianchao Sun, Huan Yu. Gene Regulatory Relationship Mining Using Improved Three-Phase Dependency Analysis Approach |
| 347 | -- | 353 | Firat Ismailoglu, Rachel Cavill, Evgueni N. Smirnov, Shuang Zhou 0001, Pieter Collins, Ralf Peeters. Heterogeneous Domain Adaptation for IHC Classification of Breast Cancer Subtypes |
| 354 | -- | 357 | Efraín Pinzón-Reyes, William Armando Alvarez, Paola Rondón-Villarreal, Hernán Guillermo Hernández. Softepigen: Primers Design Web-Based Tool for MS-HRM Technique |
| 358 | -- | 364 | Nataliya Sokolovska, Olga Permiakova, Sofia K. Forslund, Jean-Daniel Zucker. Using Unlabeled Data to Discover Bivariate Causality with Deep Restricted Boltzmann Machines |
| 365 | -- | 0 | Shailima Rampogu, Seok-Ju Park, Keun-Woo Lee, Ayoung Baek, Rohit Bavi, Minky Son, Guang Ping Cao, Raj Kumar, Chanin Park, Amir Zeb, Rabia Mukthar Rana. Correction to "Identification of Novel Scaffolds with Dual Role as Antiepileptic and Anti-Breast Cancer" |