Abstract is missing.
- Preface
- Foreword
- An introduction to molecular biology for mathematicians and computer programmersWalter M. Fitch. 1-32
- New uses for uniform lifted alignmentsDan Gusfield, Lusheng Wang. 33-52
- Sequence alignment and phylogeny constructionMartin Vingron. 53-64
- A new look at tree models for multiple sequence alignmentDannie Durand. 65-84
- Sequence alignment in molecular biologyAlberto Apostolico, Raffaele Giancarlo. 85-116
- Formal language theory and biological macromoleculesDavid B. Searls. 117-140
- Global optimization approaches in protein folding and peptide dockingChristodoulos A. Floudas, John L. Klepeis, Panos M. Pardalos. 141-172
- The topologically driven strand separation transition in DNA---methods of analysis and biological significanceCraig J. Benham. 173-198
- Parallel strategies for DNA manipulation and analysisCassandra L. Smith, Takeshi Sano, Natalia E. Broude, Charles R. Cantor. 199-212
- A column-generation based branch-and-bound algorithm for sorting by reversalsAlberto Caprara, Giuseppe Lancia, See-Kiong Ng. 213-226
- Visualizing measures of genetic distanceEric M. Jordan. 227-240
- Fragment assembly system for DNA sequencing projectsLuciano Milanesi, M. Marsilli, Giancarlo Mauri, C. Rolfi, L. Uboldi. 241-258
- Performance of the CAP2 sequence assembly programXiaoqiu Huang. 259-270
- A simple toolkit for DNA fragment assemblyJoão Meidanis. 271